Sol Genomics Network

Unigene SGN-U208470

Unigene Basic Information

Unigene ID:	SGN-U208470
Unigene Build:	Petunia hybrida #1
Date:	2004-03-30
Organism:	P.hybrida
Alternative ID:	208470
mRNA sequence:	Length: 844 bp

>SGN-U208470 Petunia hybrida #1 (2 members)
CATATGCCTTCAGATTTGTTGGTGAGTGGCTGAAATGGTTGTACACGGATGTAACCCAAAGACTGCAAGCAAATGATTTCTCAACCTTGC
CTGAGGCGCACGCATGTACTGCAGGGTTAAAGTCTTTGACGACCACTGCCACTGCTGATGGGATTGAAGAATGCAGAAAGTTATGTGGAG
GTCATGGTTATCTTTGTAGCAGTGGGCTTCCAGAATTATTTGCCGTTTATGTTCCTGCCTGTACATACGAAGGAGATAACACGGTCCTGC
TACTACAGGTTGCAAGGTTTCTTATGAAGACCGTTTCACAGCTGGGCTCCGGAAAGAAGCCAGTGGGTACCATAGGTTATATGGGAAGAA
TTGAACACTTGATGCAATGCCGTTCTGATGTGAAACAAGCGAAGGACTGGTTGAAACCTAGTGCAATAGTGGAAGCATTTGAAGCAAGGG
CTGCCAGAATGTCTGTTGCTTGTGCTCAGAATCTCAGCAAGTTTGATAATCCAGAAGAAGGCTTTGCAGAACTCGCAGCTGATTTAGTTG
AAGCAGCACTTGCTCACTGCCAATTGATTGTCGTCTCCAAGTTTATTGAGAAGTTGCAACAAGATATTTCCGGGAAAGGGGTTAAGCAAC
AGCTGGAGGTGCTTTGCGGCATCTATGCACTCTTCCTTCTTCACAAACATCAAGGAGATTTTCTCGGGACTGCCTATATCACCTCAAAGC
AGGCAGCACTTGTTAATGAGCAACTCAGAGCCTTGTATTCCCAGCTTCGTCCAAATGCTATTTCGCTGGTTGATGCATTTAACTATACTG
ATCACTAGCTTGATTCAATTCTTGGACGATATGA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (2)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Petunia x hybrida	Petunia-RF	whole fruit (ovaries) several	853	1
Petunia x hybrida	cPHA	stamens stamens from open flowers on 18-20 week old plants	6801	1

mRNA member sequences (2)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 2 | go: 3 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	251	Acyl-CoA_dh_M Acyl-CoA_dh_C	62
2	24049	ACOX Acyl-CoA_dh_M Acyl-CoA_dh_C	9
5	58103	ACOX Acyl-CoA_dh_M Acyl-CoA_dh_C	9
1.1	101614	Acyl-CoA dehydrogenase central region - Molecular Function: acyl-CoA dehydrogenase activity (GO:0003995) - Biological Process: electron transport (GO:0006118) Acyl-CoA dehydrogenase type1/2 C-terminal - Molecular Function: acyl-CoA dehydrogenase activity (GO:0003995) - Biological Process: electron transport (GO:0006118) Acyl-CoA dehydrogenase middle and N-terminal Acyl-CoA dehydrogenase C-terminal-like	58
2	119591	Acyl-CoA oxidase C-terminal - Molecular Function: acyl-CoA oxidase activity (GO:0003997) - Cellular Component: peroxisome (GO:0005777) - Biological Process: fatty acid beta-oxidation (GO:0006635) Acyl-CoA dehydrogenase middle and N-terminal Acyl-CoA dehydrogenase central region - Molecular Function: acyl-CoA dehydrogenase activity (GO:0003995) - Biological Process: electron transport (GO:0006118) Acyl-CoA dehydrogenase type1/2 C-terminal - Molecular Function: acyl-CoA dehydrogenase activity (GO:0003995) - Biological Process: electron transport (GO:0006118)	14
5	130957	Acyl-CoA oxidase C-terminal - Molecular Function: acyl-CoA oxidase activity (GO:0003997) - Cellular Component: peroxisome (GO:0005777) - Biological Process: fatty acid beta-oxidation (GO:0006635) Acyl-CoA dehydrogenase C-terminal-like Acyl-CoA dehydrogenase middle and N-terminal Acyl-CoA dehydrogenase central region - Molecular Function: acyl-CoA dehydrogenase activity (GO:0003995) - Biological Process: electron transport (GO:0006118) Acyl-CoA dehydrogenase type1/2 C-terminal - Molecular Function: acyl-CoA dehydrogenase activity (GO:0003995) - Biological Process: electron transport (GO:0006118)	8

*i value: controls inflation, a process to dissipate family clusters. At high i value, genes tend to be separated into different families.
**Annotation: the most common InterPro annotation(s) of the Arabidopsis members in the family.

Preceding Unigenes (0)

None

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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