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Unigene SGN-U210925

Unigene Basic Information

Unigene ID:	SGN-U210925
Unigene Build:	Petunia hybrida #1
Date:	2004-03-30
Organism:	P.hybrida
Alternative ID:	210925
mRNA sequence:	Length: 284 bp

>SGN-U210925 Petunia hybrida #1 (1 members)
TTGGAGTACCAGCTACGTTTGCTGCCCAAATAATTAAGAAGGAAAATCCAAAACTAGTTAACATTCCAAGTATACAAAATGGTAGGTTTG
TGACACAAGATTTCAGATGTGATAGAGTTCGTCTCTTTGTTAATGTATTGGACTTTGTCGTAGCAATTCCCCTGGTCGGTTAAGGGAAAA
TCTACTCGCATCAACTGTACTATATCTACTATATATTTGGTGATACAGCCCCAACTATTAAATAAATTGGAGCAGTATAGATATGTTTAG
TGTCAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (1)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Petunia x hybrida	cPHA	stamens stamens from open flowers on 18-20 week old plants	6801	1

mRNA member sequences (1)

Alignment image suppressed for unigene with only one aligned EST SGN-E536057
[Show Image]

Markers Information (0)

Unigene Mapped Marker Information

No member sequence or clone is mapped.

COSII Markers Information

None cosii markers associated to this unigene.

Expression Data (0)

No expression data was found associated to this unigene

Annotations (manual: 0 | blast: 1 | go: 2 )

Manual annotations

None manual annotation was found for this unigene

Blast Annotations [Show All]

Database	Program	Best Match	Score	E-value	Identity	Alignment Length	Frame
genbank	blastx	gi\|688425\|dbj\|BAA05472.1\|	85.5	2.1e-16	73.21	168 bp (59.2%)	3
Description:	tumor-related protein [Nicotiana glauca x Nicotiana langsdorffii]
arabidopsis	blastx	No significant hits ( or none blast was used over this dataset )

swissprot	blastx	No significant hits ( or none blast was used over this dataset )

GO Terms Annotations

GO:0009611 response to wounding
GO:0004867 serine-type endopeptidase inhibitor activity

Protein prediction analysis (2)

Prediction based on longest six frame method

>SGN-P206286 (70 Aa)

TYLYCSNLFNSWGCITKYIVDIVQLMRVDFPLTDQGNCYDKVQYINKETNSITSEILCHKPTILYTWNVN

SignalP predicts non-secretion with a score of 0.228

No InterPro domain matches or not analyzed.

Prediction based on ESTScan [ Show ESTScan Detail]

>SGN-P43559 (56 Aa)

GVPATFAAQIIKKENPKLVNIPSIQNGRFVTQDFRCDRVRLFVNVLDFVVAIPLVG

SignalP predicts non-secretion with a score of 0.041

IPR000864 Proteinase inhibitor I13, potato inhibitor I

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	481	Potato_inhibit	37
2	22320	Potato_inhibit	35
5	56585	Potato_inhibit	31
1.1	101408	Proteinase inhibitor I13 potato inhibitor I - Molecular Function: serine-type endopeptidase inhibitor activity (GO:0004867) - Biological Process: response to wounding (GO:0009611)	252
2	118472	Proteinase inhibitor I13 potato inhibitor I - Molecular Function: serine-type endopeptidase inhibitor activity (GO:0004867) - Biological Process: response to wounding (GO:0009611)	102
5	128979	Proteinase inhibitor I13 potato inhibitor I - Molecular Function: serine-type endopeptidase inhibitor activity (GO:0004867) - Biological Process: response to wounding (GO:0009611)	86

*i value: controls inflation, a process to dissipate family clusters. At high i value, genes tend to be separated into different families.
**Annotation: the most common InterPro annotation(s) of the Arabidopsis members in the family.

Preceding Unigenes (0)

None

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