Sol Genomics Network

This unigene is from an out-of-date build, Lycopersicon Combined #3
It has been split into SGN-U577209, SGN-U578861, SGN-U578911, SGN-U578974, SGN-U590877, and SGN-U593428 in the current build, Tomato 200607 #2

Unigene SGN-U212653

Unigene Basic Information

Unigene ID:	SGN-U212653
Unigene Build:	Lycopersicon Combined #3
Date:	2004-06-30
Organism:	S.lycopersicum S.habrochaites S.pennellii
Alternative ID:	212653
mRNA sequence:	Length: 1595 bp

>SGN-U212653 Lycopersicon Combined #3 (126 members)
TTCATTTCCCTAAAAACACCGTCAAGAACCTCTCTTCTCCTCTTCTCGCCGCAACTTTCAATCGTTTCTATTGACGTAGTTCAACAGATC
GAAAGATGTTTGGAAGAGCACCGAAGAAGAGCGATAATACAAAGTATTATGAGATCTTAGGAGTTCCTAAGGCTGCTTCTCAGGAAGATC
TCAAAAAGGCTTATCGTAAAGCTGCTATCAAAAATCACCCTGATAAGGGAGGCGATCCTGAGAAGTTTAAAGAGCTTGCTCAAGCTTATG
AGGTCTTGAGTGACCCGGAGAAGCGTGAGATATATGATCAGTATGGAGAGGATGCTCTAAAGGAAGGAATGGGTGGTGGAGGTGGTGGAC
ATGACCCATTTGATATATTTCAATCATTCTTCGGTGGTGGTGGAAACCCCTTTGGTGGTGGTGGAAGCAGCAGAGCTCGTAGACAAAGAA
GAGGAGAGGATGTTATCCACCCGCTCAAGGTTTCTTTAGAGGATCTTTACAATGGGACATCAAAGAAGCTTTCACTATCTCGCAATGTGT
TGTGCTCAAAGTGCAAGGGTAAAGGGTCCAAGTCAGGTGCTTCAATGAAATGTTCTGGCTGTCAAGGGTCTGGAATGAAAGTTTCTATCA
GACAGCTCGGTCCATCCATGATCCAGCAGATGCAGCACCCTTGCAATGAGTGTAAGGGTACTGGTGAGATGATCAGTGACAAAGATAGGT
GCCCTCAGTGTAAGGGTGAGAAGGTTGTGCAGGAGAAGAAGGTGTTGGAAGTTCACGTGGAGAAGGGTATGCAGAATGGGCAGAAAGTAA
CATTTCCAGGCGAGGCAGATGAAGCGCCAGATACCATCACTGGAGACATTGTTTTTGTCTTGCAACAAAAGGAACATCCTAAGTTCAAGC
GAAAGGGAGATGATCTTTTTGTTGAGCACACATTGACCTTGACTGAGGCCCTATGTGGTTTCCAGTTTGTCTTGACTCACCTAGACAACA
GACAGCTGCTCATTAAGTCCCAACCTGGCGAAGTTGTCAAGCCTGATCAGTTTAAGGCTATCAACGATGAAGGAATGCCGATGTACCAAA
GGCCGTTCATGAGAGGTAAAATGTACATTCACTTCACTGTTGATTTCCCCGAGTCATTAACAGCAGAGCAGTGCAAGAACCTTGAGGCTG
TGCTGCCTCCAAAACCCAAATTGCAAGTATCTGATATGGAATTAGACGAGTGTGAGGAGACTACTTTGCACGATGTGAACATTGAGGATG
AGATGCGAAGGAAGCAGCAAGCTGCCCAAGAGGCATATGACGAAGATGATGATATGCCTGGTGGTGCACAGAGAGTCCAATGTGCACAGC
AGTAATTTGGCATTTGCTATCTTGTGATAAGTGGGTAGGTTACTAGTAAAAGGATATGGATATTTTTTCTTATGCAGACCGACACTAAGT
GTGCTTACATGTTTACGCAATTTGAATTTGTTTTGATCTGTTATGTCATTCAATAACCCTTTTTAATTCCAAGTCCAATTTGAAACTCAA
AAAAAAAAAAAAAACGAAGAAAAATTGCTGGATTTCACTTCAAAAAAAAAAAAAAAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (25)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	9
Solanum lycopersicum	cLED	ovary 5 days pre-anthesis to 5 days post-anthesis	9878	1
Solanum lycopersicum	cLEF	fruit pericarp mature green	5317	6
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	12
Solanum lycopersicum	cLEI	whole seedlings germinating seed	3927	2
Solanum lycopersicum	cLEL	developing flower buds and flowers anthesis-stage flowers from full grown plants, 4-8 weeks old	11276	17
Solanum lycopersicum	cLEM	fruit immature green fruit	4240	3
Solanum lycopersicum	cLEN	fruit pericarp red ripe to over-ripe	3979	3
Solanum lycopersicum	cLER	leaf 4 weeks	5127	2
Solanum lycopersicum	cLES	leaf 4 weeks	5243	2
Solanum lycopersicum	cLET	leaf 4-6 weeks	9135	4
Solanum lycopersicum	cLEW	mixed roots grown under different nutrient and mineral difficiencies 4-8 weeks	3175	1
Solanum lycopersicum	cLEX	root fruit-set stage/post-fruit loading	3142	5
Solanum lycopersicum	cLEY	root pre-anthesis/pre-fruit loading	3259	5
Solanum lycopersicum	cLEZ	root germinating seedlings	2373	2
Solanum lycopersicum	cTOA	developing flower buds and flowers 0-3mm flower buds from full grown plants	6259	7
Solanum lycopersicum	cTOB	developing flower buds and flowers 3-8mm flower buds from full grown plants	5524	6
Solanum lycopersicum	cTOC	developing flower buds and flowers 8mm to pre-anthesis flower buds from full grown plants	5759	7
Solanum lycopersicum	cTOD	flowers anthesis-stage flowers from full grown plants	5642	6
Solanum lycopersicum	cTOE	Crown gall crown galls from full-grown plants (4-8 wks old)	5204	7
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	7
Solanum lycopersicum	cTOS	suspension cultures	8026	9
Solanum lycopersicum	cTSC	seed	2256	1
Solanum lycopersicum	cTSD	seed	1504	1
Solanum habrochaites	cLHT	leaf trichomes 4-8 weeks old	2457	1

mRNA member sequences (126)

Alignment image suppressed for unigene with 126 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (0)

Annotations (manual: 2 | blast: 2 | go: 3 )

Protein prediction analysis (1)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	9	DnaJ_N	612
2	21988	DnaJ_N	254
5	56281	DnaJ_N	140

Preceding Unigenes (1)

Unigene	Build
SGN-U143187	Lycopersicon Combined #2

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
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Event Description:
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