Sol Genomics Network

This unigene is from an out-of-date build, Lycopersicon Combined #3
It has been split into SGN-U584409 and SGN-U584412 in the current build, Tomato 200607 #2

Unigene SGN-U213158

Unigene Basic Information

Unigene ID:	SGN-U213158
Unigene Build:	Lycopersicon Combined #3
Date:	2004-06-30
Organism:	S.lycopersicum S.habrochaites S.pennellii
Alternative ID:	213158
mRNA sequence:	Length: 1423 bp

>SGN-U213158 Lycopersicon Combined #3 (110 members)
TCAATTTTATCATTATCTGTGTCACACACAAAAACCCTTTTGATTTTTCTCTAACCCCAAATCTCCCCATTTACTCAAATAATCTCACCT
TTTTCTTTTTTCACTTCTCTATCTCTTTGCAGCCATGTCTGAGGGAGAGAAGGCTTTGCCGACTGCATCCAAAGATGAGAAGTCTGGGGC
AGCTGAGAGTAAAAAATCTCCTGAGTCTTCTACCGTGGAAGCACCATCAGGAGAGGGGAGAACAGCATCTGCTGCGGCTGGAGCTGGAGT
CCAAAATCCCTTTGATTTCTCAGCCATGTCTGGACTGCTCAATGACCCAAGTATCAAAGAACTAGCGGAGCAGATTGCAAAAGACCCTGC
ATTTAATCAGATGGCAGAGCAGCTTCAGAAGACCTTTCAAGGTGCAGCAGTGGAAGAAAGTGTTCCCAACTTTGATAGCCAACAATACTA
CTCTACAATGCAACAGGTTATGCAAAATCCTCAGTTTATGACCATGGCTGAGCGGCTTGGTAATGCATTGATGCAGGATCCATCCATGTC
TGGCATGCTTGAGAGTTTGTCAAACCCTGCTCAGAAGGAGCAACTTGAAGAACGGATGGCGCGCATTAAAGAAGACCCATCACTCAAACC
AATCTTGGAAGAGATAGAGAGCGGAGGACCAGCTGCAATGATGAGGTATTGGAACGATCAAGATGTTCTGAAGAAGATTGGTGAAGCAAT
GGGTTTTGCTGCTGGAGGAGAGGGTGCTACCTCTTCTGAAATACCTGGGCCAGATGAAACGGAAGAGGCAAATGAAGATGAATCTGTTGT
TCATCAGTGTGCTAGTGTTGGTGATGCAGAGGGCTTGAAGGCAGCACTAGCTGCTGGTGCTGACAAAGATGAAGAAGATTCAGAAGGAAG
GACAGCATTGCATTTTGCTTGTGGATATGGCGAGGAGAAGTGTGCTCAGCTCCTTGTTGAAGCTGGGGCAAAGGTTGATGCATTGGACAA
GAACAAGAATACTGCTCTTCACTATGCTGCTGGATATGGTAGAAAGGAGTGTGTAGCACTGCTGCTGGAGAATGGAGCCGCTGTAACTCT
TCAAAACTTGGACGGAAAGACGCCAATTGATGTTGCCAAACTCAACAACCAGCAGGATGTCCTAAAGCTGCTTGAGAAGGATGCATTTCT
GTGAACTGGCATAGATGTTTGGTCATGTACAATTGAAACTTTGGATGTCACAGAGTGTGATTCAAGACATCTGTACTTTGAGGATCTTAT
CCATACTTCTAGTGTTATCTTTGCCAGTGTATAATTTTATTGTTTTTCTAAGATTGTGCCTGTTCGAAGAATTTCCTCTGGATGTTTTGT
ATTTGTAAACATCTTTGCTACCATGTCAAATTAATCTTCAACAATTTTTTTTTCCAAAAAAAAAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (23)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum pennellii	cLPT	leaf trichomes 4-8 weeks old	2729	1
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	4
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	11
Solanum lycopersicum	cLED	ovary 5 days pre-anthesis to 5 days post-anthesis	9878	5
Solanum lycopersicum	cLEF	fruit pericarp mature green	5317	7
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	21
Solanum lycopersicum	cLEI	whole seedlings germinating seed	3927	9
Solanum lycopersicum	cLEL	developing flower buds and flowers anthesis-stage flowers from full grown plants, 4-8 weeks old	11276	6
Solanum lycopersicum	cLEM	fruit immature green fruit	4240	8
Solanum lycopersicum	cLEN	fruit pericarp red ripe to over-ripe	3979	3
Solanum lycopersicum	cLER	leaf 4 weeks	5127	3
Solanum lycopersicum	cLES	leaf 4 weeks	5243	2
Solanum lycopersicum	cLET	leaf 4-6 weeks	9135	2
Solanum lycopersicum	cLEX	root fruit-set stage/post-fruit loading	3142	4
Solanum lycopersicum	cLEY	root pre-anthesis/pre-fruit loading	3259	1
Solanum lycopersicum	cLEZ	root germinating seedlings	2373	1
Solanum lycopersicum	cTOA	developing flower buds and flowers 0-3mm flower buds from full grown plants	6259	2
Solanum lycopersicum	cTOC	developing flower buds and flowers 8mm to pre-anthesis flower buds from full grown plants	5759	4
Solanum lycopersicum	cTOD	flowers anthesis-stage flowers from full grown plants	5642	1
Solanum lycopersicum	cTOE	Crown gall crown galls from full-grown plants (4-8 wks old)	5204	3
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	8
Solanum lycopersicum	cTOS	suspension cultures	8026	2
Solanum habrochaites	cLHT	leaf trichomes 4-8 weeks old	2457	2

mRNA member sequences (110)

Alignment image suppressed for unigene with 110 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (4)

Annotations (manual: 3 | blast: 2 | go: 0 )

Protein prediction analysis (1)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	19	ANK	371
2	22435	ANK	29
5	56853	ANK	21

Preceding Unigenes (1)

Unigene	Build
SGN-U143687	Lycopersicon Combined #2

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
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Event Description:
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