Sol Genomics Network

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This unigene is from an out-of-date build, Lycopersicon Combined #3
It has been superseded by SGN-U578033 in the current build, Tomato 200607 #2

Unigene SGN-U213590

Unigene Basic Information

Unigene ID:	SGN-U213590
Unigene Build:	Lycopersicon Combined #3
Date:	2004-06-30
Organism:	S.lycopersicum S.habrochaites S.pennellii
Alternative ID:	213590
mRNA sequence:	Length: 1179 bp

>SGN-U213590 Lycopersicon Combined #3 (64 members)
TCAATAATTATGTCTAGCCAAAAATTTGTTCGTCCAATTTTTGACAATCCATTTTTGAACATTGAAGAATTACCAAATGATACAATTAAA
CGTCAACCTGAACCCCTCACACAAGCCAATTTTGATCCCAATGGTACTTCTTTAGTCATATCTAAGGATGTAGACCTAGACAGCAATAAA
AAAACATGGATGAGAATCTACGTACCACGACGAATAATTGCAAATCATGACGATGATAAATTGCCAGTTATTTTCTACTATCATGGCGGA
GGCTTTGTCTTCTTTCATGTTAATAGTTATGGTTCGGATCTATTTTGTCAACAACTATCTGAGAAACTTGACGCGATGATTATTGCCCTT
GAATATCGTTTGGCCCCTGAAAATCGACTTCCTGCAGCTTACGATGATGCCATAGATGGGTTAAATTGGATTAAATCAACTCAAGATGAA
TGGATTCAAAATTATGCTAATTTGAGTAATGTTTATCTTTTTGGATCAAGTTCTGGTGGAAACTTGGCTTACCATGCAGGGTTACGCGTA
GCATCTTTTTCAGACAAAAAACTAGAACCAGTGAAGATCAAAGGGCTTATCTTGCATCAACCATATTTCAGTGGAAAAAATAGGACAGAA
TCTGAAGAGAAGCTAAAAGATGATCCAACTTTGCCATTTCAAGCAATTGATAAGATGTTTGACTTGTCCTTACCAAAAGGAACACTAGAT
CATGATCATGAATATTCCAACCCATTACTTAACGGAGGGTCAAAGCATTTAGATGATATGATCACACGAGGCTGGGGGATCCTTGTCACC
GGTGTCTCTGAAGATCCTTTAATCGATGCCTCGCGCAACTTTGCTGATTTTATTGAAAAGAAAGGTGTAAAAACTTTCAAGCTCTTTGGA
GATGGTTACCATGTTATTGAGTTGTTTGAGCCATCTAAGGCTGCAGTCTTATTTGATGCCATTAGGGATCTCATATCTGCTACTAAAAAT
TAAAAGTATTGAGTTTGTTTTGTTATATTTCCTTTTGTGCAAATAAGAGAGGAGTGTATAGTATGCATTCCTTTGTGTGTAAGATTACTT
TAAGTTGTTATATTTTTCTCATGAATAAAAGTTTCTAGGATTGAGTTAAAAAAAAAAAAAAAAAAACTCGAGACTAGGGGGGGGCCCGGT
ACCCAATCG

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (8)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	6
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	49
Solanum lycopersicum	cLED	ovary 5 days pre-anthesis to 5 days post-anthesis	9878	2
Solanum lycopersicum	cLEI	whole seedlings germinating seed	3927	1
Solanum lycopersicum	cLEN	fruit pericarp red ripe to over-ripe	3979	1
Solanum lycopersicum	cLES	leaf 4 weeks	5243	1
Solanum lycopersicum	cTOE	Crown gall crown galls from full-grown plants (4-8 wks old)	5204	1
Solanum lycopersicum	cTOS	suspension cultures	8026	3

mRNA member sequences (64)

Alignment image suppressed for unigene with 64 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (4)

Annotations (manual: 2 | blast: 2 | go: 1 )

Protein prediction analysis (1)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	96	Ser_estrs	130
2	22036	Ser_estrs	111
5	56893	Ser_estrs	20

Preceding Unigenes (1)

Unigene	Build
SGN-U144111	Lycopersicon Combined #2

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
Event Type:
Event Description:
Event Web URL:

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