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This unigene is from an out-of-date build, Lycopersicon Combined #3
It has been superseded by SGN-U562601 in the current build, Tomato 200607 #2

Unigene SGN-U213664

Unigene Basic Information

Unigene ID:	SGN-U213664
Unigene Build:	Lycopersicon Combined #3
Date:	2004-06-30
Organism:	S.lycopersicum S.habrochaites S.pennellii
Alternative ID:	213664
mRNA sequence:	Length: 2089 bp

>SGN-U213664 Lycopersicon Combined #3 (40 members)
GATTTTAACATGGGAGCAATGGAAAACAAGAGCTTGAATATATTCAATTCCAAGCTTGTCCTGGCATCCCCAGAAACTGCAACAGATGCT
GATTATGCGGCTATATTGGGTGTGATTGGACATGAGTACTTCCACAATTGGACAGGCAACAGAGTTACATGTCGTGACTGGTTCCAGCTC
AGTTTAAAGGAAGGACTTACTGTTTTCCGTGATCAGGAGTTTTCGTCTGATTTGGGCAGCCGTCCTGTGAAAAGAATTGCTGATGTCTCA
AAGCTTCGAATGTATCAGTTCCCGCAGGATGCTGGTCCAATGGCTCATCCTGTAAGGCCTCACTCTTATATAAAGATGGATAACTTCTAC
ACAGTTACGGTATATGAGAAGGGAGCTGAAGTGGTCAGGATGTACAAAACCTTGTTAGGTAGCCAAGGATTTAGAAAAGGCACAGATTTA
TATTTTGAGAGGCATGATGGTCAAGCAGTAACATGTGAAGACTTTTTTGCTGCCATGCGAGATGCCAACAATGCAGATTTTGCTAATTTC
TTGTTATGGTACTCGCAAGCTGGGACACCTGTAGTGAAGGTTACCACAAATTATAATGCTGAAGGGCGCACTTTCTCCCTCAAGTTTAGT
CAAGAGGTGCCTCCAACCCCCGGCCAGTCTGCAAAAGAACCTATGTTTATTCCTGTTGCTGTAGGTCTGCTGGATTCAAGTGGTAAGGAC
ATGCCTCTATCTTCGGTTCATCATGATGGGAAATTGGAGAGTTTTGCGAGCAGTGGTCAAAACGTATACACCACAGTTCTCCGCGTAACG
AAGAAGGAGGAGGAATTTGTGTTCAATGACGTATCTGAGAGGCCAACACCATCGATATTGCGAGGATTCAGTGCTCCCATCAGGCTTGAG
TCTGATCTCACTGATAGTGATCTTCTTTTCCTTCTTGCTCATGATTCTGATGAGTTTAACCGGTGGGAGGCGGGACAAGTGTTGGCAAGG
AAGTTGATGCTCAGTCTGGTAGCTGATTTCCAACAGAATAAGGCTTTGGTTCTTAACCCTCAGTTTTTGCAGGGGATCAAAAGCATACTC
ACCGACTCAAGCTTGGATAAGGAATTCATTGCAAAGGCAATAACTTTGCCTGGTATAGGAGAAATCATGGACATGATGACGGTTGCTGAT
CCAGATGCCGTTCATGCAGTGCGGACTTTCATCAGGAAGCAACTGGCTTCTGAATTGAAACAAGAGTTCCTTATCACTGCTAAAAACAAC
AGGAGCTCTGGTGCTTATGAGTTTGATCATAACAATATGGCACGTCGTGCTCTTAAAAATATTGCTCTTGCTTATCTTGGATCACTTGAA
AACCCAGAAATCACAGAACTTCTATTGAATGAATACAGAAACGCCACAAACATGACAGATCAGTTTGCAGCTTTAGTGGCTATCGATCAG
CAACCTGCAATTCGTGAAGAAATTTTGGCTGATTTCTATAACAAGTGGCAGGATGATTACTTGGTTGTGAACAAGTGGCTTGCTCTTCAA
GCTATGTCAGACATGCCTGGTAATGTTGAGAATGTCAAGAAACTTCTAAACCATACAGCCTTTGACCTATGTAATCCAAATAAGGTTTAT
TCGTTGATCGGAGGATTTTGTGGTTCACCTGTCAACTTCCATAGCAAGGATGGCTCCGGCTACAAGTTCTTGGGAGAACTAGTGGTGAAG
CTTGACAAGATGAATCCACAGGTGGCTTCACGAATGGTTTCAGCGTTCTCCAGGTGGAAACGTTATGATGAAACAAGACAGAGTCTCGCG
AAGGAACAATTGGAGATGATCTTGTCTACTGAGGGACTCTCAGAGAATGTGTTTGAAATCGCATCGAAGAGCTTGGCAGCTTGATTTTTA
TATTTTTGGTTTCATTTTTCAGTTATTTGAACCGTGCTCTATTTGTTCCAAAGAGTTTATAATTATGTAATGGTTTCAGTAAACATTAAA
ACTTAGTTACACTTAGTGATATTCATACCTGCGATTTGCATTAAAATTGCATTGTTCGTAGATATTAATTCCTNCGTTTAAAAAATAATA
ATGACCTAATTTGATTGAC

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (18)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum pennellii	cLPT	leaf trichomes 4-8 weeks old	2729	1
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	4
Solanum lycopersicum	cLED	ovary 5 days pre-anthesis to 5 days post-anthesis	9878	2
Solanum lycopersicum	cLEF	fruit pericarp mature green	5317	2
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	8
Solanum lycopersicum	cLEI	whole seedlings germinating seed	3927	1
Solanum lycopersicum	cLEL	developing flower buds and flowers anthesis-stage flowers from full grown plants, 4-8 weeks old	11276	3
Solanum lycopersicum	cLEM	fruit immature green fruit	4240	2
Solanum lycopersicum	cLEN	fruit pericarp red ripe to over-ripe	3979	1
Solanum lycopersicum	cLER	leaf 4 weeks	5127	1
Solanum lycopersicum	cLES	leaf 4 weeks	5243	1
Solanum lycopersicum	cLET	leaf 4-6 weeks	9135	1
Solanum lycopersicum	cLEX	root fruit-set stage/post-fruit loading	3142	1
Solanum lycopersicum	cTOA	developing flower buds and flowers 0-3mm flower buds from full grown plants	6259	2
Solanum lycopersicum	cTOD	flowers anthesis-stage flowers from full grown plants	5642	2
Solanum lycopersicum	cTOE	Crown gall crown galls from full-grown plants (4-8 wks old)	5204	4
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	3
Solanum lycopersicum	cTSD	seed	1504	1

mRNA member sequences (40)

Alignment image suppressed for unigene with 40 aligned sequences.
[Show Image]

Markers Information (1)

Expression Data (0)

Annotations (manual: 1 | blast: 2 | go: 2 )

Protein prediction analysis (1)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	644	Peptidase_M1 Pept_M_Zn_BS	28
2	23454	Peptidase_M1 Pept_M_Zn_BS Peptidase_M61 HypA	12
5	57678	Peptidase_M1 Pept_M_Zn_BS Peptidase_M61 HypA	11

Preceding Unigenes (1)

Unigene	Build
SGN-U144314	Lycopersicon Combined #2

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
Event Type:
Event Description:
Event Web URL:

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