Sol Genomics Network

This unigene is from an out-of-date build, Lycopersicon Combined #3
It has been superseded by SGN-U579003 in the current build, Tomato 200607 #2

Unigene SGN-U213821

Unigene Basic Information

Unigene ID:	SGN-U213821
Unigene Build:	Lycopersicon Combined #3
Date:	2004-06-30
Organism:	S.lycopersicum S.habrochaites S.pennellii
Alternative ID:	213821
mRNA sequence:	Length: 1227 bp

>SGN-U213821 Lycopersicon Combined #3 (52 members)
TTTTCTATCTATATAACACCACAATCTTTGTACCAAATTATTTAACCACAAAAAATGGAGTTCTCTAAGATAACTTCACTTCTTTTCATT
TCTATGCTTTTCCTTTCTTCATTCACTCCCATTCTTGGATGTGGCTATTGTGGTAAACCTTCTCACAAGCCCAAAAAGCCCAAAGTTCCC
ACTCCCATTGTCAAACCCCCTGTCGATTTGCCCCCTATCGGAATTCCACCAATCGTGAAACCACCTGTTAATTTGCCCCCTATCGGAATT
CCACCGATCGTAAAACCACCAGTCAAATTGCCACCTATCGGAATTCCACCAATCGTAAAACCGCCCGTCATATTGCCACCTGTCGGAATT
CCACCAATCGTAAAACCACCTGTCAAATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTTGATTTGCCACCTGTTGGGATT
CCACCGGTCACAGTTCCACCAATTGTAAAACCTCCAGTTGATTTGCCACCTATTGGAATTCCACCAGTCACAGTTCCACCAGTAATTAAA
CCATCACCTAAAGGGAAAAAACCTTGTCCACCAACAACAAAGGCAACATGCCCAATTGACACATTGAAACTTGGGGCTTGTGTGGATCTT
TTAGGTGGGCTTGTTCATATTGGCCTTGGTGATCCAGCTGTTAATGAATGTTGTCCAATACTTAGTGGGCTTGTTGAACTTGAAGCTGCT
GCTTGCCTTTGCACAACACTTAAAGTCAAATTACTTAACCTCAAAATCTATGTACCTCTAGCACTTCAACTCCTTGTTACTTGTGGAAAG
AGTCCACCACCTGGCTACACTTGTTCCATCTAGGTTTCCAATCTGAAATTTGAAGAAATTGCATGGATTGCCATGAAAGGATGTCCAATT
TATGATTTATTTAATTTCTCTCCACCCCACCCCACCCCTCAAAATTGTATTTTATGTATTGTTTTATTTTGGCTTTGTGGAATTGTTATT
TAATGGAATTATTATTATTATTATCATTATTACTATTATTATTATTTCAGTGTATCGTTTGAATGTCATGTTTCAATGAATTGGGAAAAA
AAAAAACAAGTATTTTTTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGTATTTTTTTCAATGTTTTAGTGGTCTTATTTGAAAATTTT
AATTTTGTTTAATTTTAAAAAAAAAAAAAAAAAAACTCGAGACCTGCAGCCCGGGGG

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (12)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	1
Solanum lycopersicum	cLEB	vegetative shoots including meristems and small expanidng leaves 8 weeks	898	1
Solanum lycopersicum	cLEI	whole seedlings germinating seed	3927	4
Solanum lycopersicum	cLEL	developing flower buds and flowers anthesis-stage flowers from full grown plants, 4-8 weeks old	11276	13
Solanum lycopersicum	cLER	leaf 4 weeks	5127	5
Solanum lycopersicum	cLES	leaf 4 weeks	5243	2
Solanum lycopersicum	cLET	leaf 4-6 weeks	9135	13
Solanum lycopersicum	cTOA	developing flower buds and flowers 0-3mm flower buds from full grown plants	6259	1
Solanum lycopersicum	cTOB	developing flower buds and flowers 3-8mm flower buds from full grown plants	5524	1
Solanum lycopersicum	cTOC	developing flower buds and flowers 8mm to pre-anthesis flower buds from full grown plants	5759	2
Solanum lycopersicum	cTOD	flowers anthesis-stage flowers from full grown plants	5642	4
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	5

mRNA member sequences (52)

Alignment image suppressed for unigene with 52 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (0)

Annotations (manual: 1 | blast: 2 | go: 4 )

Protein prediction analysis (1)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	1	Prot_kinase	3744
2	22067	AAI	83
5	56596	AAI	30

Preceding Unigenes (2)

Unigene	Build
SGN-U144289	Lycopersicon Combined #2
SGN-U144290	Lycopersicon Combined #2

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
Event Type:
Event Description:
Event Web URL:

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