Sol Genomics Network

This unigene is from an out-of-date build, Lycopersicon Combined #3
It has been split into SGN-U579394 and SGN-U580044 in the current build, Tomato 200607 #2

Unigene SGN-U213971

Unigene Basic Information

Unigene ID:	SGN-U213971
Unigene Build:	Lycopersicon Combined #3
Date:	2004-06-30
Organism:	S.lycopersicum S.habrochaites S.pennellii
Alternative ID:	213971
mRNA sequence:	Length: 1213 bp

>SGN-U213971 Lycopersicon Combined #3 (19 members)
TCTAAGCTTCTTCTTGTTCTTCATGTTCTTATTCTCCTCCACCATCATATCAACAAAAAAAAAATCCCACTTTTTAAAACCCCAAATTCA
TAAATTTTTCGAAACCCCAAATCTTTTTTTTCACTCTTTCTATGCTCTAACAAAAAAAAAAGACATCTTTTTTGGTATAATACACCAAAA
TGTTGGTTCTTGGAAATTCCTTTGTGATATTTACATTTGTTTTGTGTTCTATATGTGTATTTACATCAGCAGATTCATCTATATATGAAG
TTCTTAAATCCCATGGATTGCCAATGGGATTATTACCAAAGGGTGTGAGGAATTTCACTTTAGATAATTCTGGGAATTTTGTGGTTCATT
TAGATCAACCTTGTAATTCAAAATTTGAGAAAAAAGAAAATGAATTGCACTATGAAAGGAATGTTTCAGGGAGGTTGAGTTTAGGTCAGA
TTGATTTGATTTCTGGGATTTCTGCTAAAGATTTGTTTTTGTGGTTTCAAGTTAAGAAAATTTATGTGTCATCTTCAAGTTCTGGGGTCA
TTTATTTTGATGTTGGAGTTGTTTCTAAGCAGTTTTCATTGTCTTCATTTGATAATCCGAAGGAATGTACTGCTGTTCAGGTTACAGATC
TTGAAGATGCCAAACAGGACTCAAAGAGTCTATCCGGGAACATTCGATACAAGCTTGATCAGGGGAATATTGGCAGTGCGATTTTGTAGA
ATATTGCAGTTCAAAATTTGGTTACAGAGTTGTTTGCACATAGCTCAATCAAGTCCTTTGGATGGTCTTTATCATTCCTTGTATGTAAAT
TGTCTGCAGAGTTTGGAAACAAATTGTGCTATACTGGTTTGCATTTTCTTGTCTAGTAAAGACAATCGCGAATTCAGAATCTAGAGTCAG
TGAAGTCGGAAAATCGAAATATTAGAAATTGGAATCAAGAAAAGGGGGTAACCAAGTAAGATATTGATATGCCAAATTGGTTGGAGGTTT
GGAGGGGTATAGGGATACAGGTTCATCTGTTCAAAAAAATGTTGAAATTTCTCAGAGAAGGTTTATTTCTTTTTTGTTGGATTCATTTAT
GGACATAGTCATGGTTATGGAATTTAAAGCAAATTACTTCTTTTTTTTTTTTGTAGTTGCAGGCATAGAATATGAAATAATGAAATAAAT
TTGCCTTTTCCTTTCTTGTAAAAAAAAAAAAAAAAAAACTCGA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (10)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	3
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	1
Solanum lycopersicum	cLED	ovary 5 days pre-anthesis to 5 days post-anthesis	9878	4
Solanum lycopersicum	cLEF	fruit pericarp mature green	5317	1
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	4
Solanum lycopersicum	cLEL	developing flower buds and flowers anthesis-stage flowers from full grown plants, 4-8 weeks old	11276	2
Solanum lycopersicum	cLEM	fruit immature green fruit	4240	1
Solanum lycopersicum	cLER	leaf 4 weeks	5127	1
Solanum lycopersicum	cLEX	root fruit-set stage/post-fruit loading	3142	1
Solanum lycopersicum	cTSB	seed	1880	1

mRNA member sequences (19)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 2 | go: 0 )

Protein prediction analysis (1)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	143	DUF538	93
2	22213	DUF538	44
5	64965		2

Preceding Unigenes (3)

Unigene	Build
SGN-U148017	Lycopersicon Combined #2
SGN-U152929	Lycopersicon Combined #2
SGN-U167421	Lycopersicon Combined #2

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
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