Sol Genomics Network

This unigene is from an out-of-date build, Lycopersicon Combined #3
It has been split into SGN-U571497 and SGN-U589207 in the current build, Tomato 200607 #2

Unigene SGN-U214875

Unigene Basic Information

Unigene ID:	SGN-U214875
Unigene Build:	Lycopersicon Combined #3
Date:	2004-06-30
Organism:	S.lycopersicum S.habrochaites S.pennellii
Alternative ID:	214875
mRNA sequence:	Length: 1355 bp

>SGN-U214875 Lycopersicon Combined #3 (30 members)
CTTTATATATAAAAATATAAAATTAATTAGGTTTTTTCTTTGTATACGGGAGAGCAGCTGCTTTGTTTTCTCTCGATCGATCGTTCAAGC
TACTCTCAAGAAACAAGCAGAGATGGGTGGAAGTGCAATAAGTGATGATTGGGAATTCACTACAAATGGAGCTCGGACACTAGTTCTGGT
TGGATGTACAGGTAATGGTAAAAGTGCCACGGGGAATAGCATTGTTGGAAGAAAGGCATTCAAGTCGATGTCTAGCTCAGCTGGTGTAAC
AAGTACTTGTGAACTACAGAGGACTGTATTAGAAGATAACCAAATTCTTGATGTGATTGATACGCCAGGATTGTTTGATTGTTCTTCTGA
ACCTGAATTTGTTGGAAACGAAATTGTTAAGTGCATCAATATGGCCAAGGATGGGATTCATGCGGTTCTTGTAGTTCTGTCTGTGCGAAC
TCGCTTTTCAAGGGAAGAACACGCAGCAGTCCAGAGTCTGAGGGAGTTCTTTGGGAGCAAAATCAGTGATTACATGATTTTGGTTTTCAC
TGGTGGGGATGATCTTGAAGATAATGATGAAACCCTGGATGGTTACTTAGGTCGTAACTGCCCCGAGCTTTTAAAGAATACCCTCAAGAT
GTGTGGAAATAGGCAAGTGCTTTTCGATAACAAGACTAAAGATCCTTTGAAGAAAGCTGAACAATTGAAACAACTACTTTTCCTGGTAAA
TGTGGTTGTGGAGAATAATGGTGGAAAACCATATACAGATGACTTGTTCAAGGAATTAAAGAAAGGAGCTACCAAACTTCATAACCAGGC
AACCGAGGTTAATTCTTTGGTGGGATATACTAAGCAAGAGAGACTAGAGTTGAAGGAACAAATGCAAAAGTCGTATGAAGAGCAACTGAA
GCGAATAACTGAAGTGGTTGAGTCTAAGCTGAAGGAAACCACCCATAGGCTTGAAGAGCAATTGGCCAAAGAGCAGGCTGCTCGGTTGAA
GGCTGAACTAAGTGCACAAAACGCACAGAAGAAATCAGATGAGGAGATTCGCAAGTTGAGAGAATATCTGGAGAGAGCTCAAAGGGAGAC
AGAGGAGCTCCGAGGTCGTTCTGGCGCATGTAACATTCTGTGAGAAAGTTATCTATATGTATATACTTTTGGGAAGAATGTGCCACTAAA
GTGAATTAACTCTTCGCTTCAACTCTTTTACTACCCGTTCTATCGTATAGAAGAGAGTAGTACATCTTGATAATGTTAAATATTCAGTTG
GATATTGTCTTGATTAGTAATCAGAAAGAGCTCGATGATGAATGATGGTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTTTNNTA
AAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (11)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	3
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	1
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	14
Solanum lycopersicum	cLEL	developing flower buds and flowers anthesis-stage flowers from full grown plants, 4-8 weeks old	11276	5
Solanum lycopersicum	cLER	leaf 4 weeks	5127	1
Solanum lycopersicum	cLES	leaf 4 weeks	5243	1
Solanum lycopersicum	cLET	leaf 4-6 weeks	9135	1
Solanum lycopersicum	cLEX	root fruit-set stage/post-fruit loading	3142	1
Solanum lycopersicum	cLEY	root pre-anthesis/pre-fruit loading	3259	1
Solanum lycopersicum	cLEZ	root germinating seedlings	2373	1
Solanum lycopersicum	cTOC	developing flower buds and flowers 8mm to pre-anthesis flower buds from full grown plants	5759	1

mRNA member sequences (30)

Alignment image suppressed for unigene with 30 aligned sequences.
[Show Image]

Markers Information (1)

Expression Data (3)

Annotations (manual: 1 | blast: 2 | go: 1 )

Protein prediction analysis (1)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	266	AIG1	58
2	22739	AIG1	20
5	56995	AIG1	18

Preceding Unigenes (1)

Unigene	Build
SGN-U145165	Lycopersicon Combined #2

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
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Event Description:
Event Web URL:

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