Sol Genomics Network

This unigene is from an out-of-date build, Lycopersicon Combined #3
It has been superseded by SGN-U579236 in the current build, Tomato 200607 #2

Unigene SGN-U215359

Unigene Basic Information

Unigene ID:	SGN-U215359
Unigene Build:	Lycopersicon Combined #3
Date:	2004-06-30
Organism:	S.lycopersicum S.habrochaites S.pennellii
Alternative ID:	215359
mRNA sequence:	Length: 1441 bp

>SGN-U215359 Lycopersicon Combined #3 (24 members)
CCTCGTGCGGACGAGGCAAAAATTTGTGTTTCTTATCTTTTTATTACCTTTTTTAGACATCTTTAATTGAAGTACTTGTTTGTTCTCTCT
TAAGGATCGGTTCGAAAGTTTAAGTTTGAGTTCTCTGTGATCTCAATCAACAGATTTATTTGTTTTTGCTCTTCTAAAAAGCAGATTTCA
ATACTGATGACAACCTCCAACACACAACAAAGCTATGACAAAACAAGTGAACTAAAAGCCTTTGATGACACAAAAGCAGGTGTCAAAGGA
CTTATTGATAGTGGAATTACTAAAGTACCTCAAATATTCATTCATCCAGAGGCCTTAGAAAATAAAACCACAAATCCCAAAAATACACAT
TTCATTTTCCCTTTAATAGACCTCCAAAACATCAGCATTAACAACAAAGAGATAGTGAAACAAATTCAAGAAGCATCAGAGACATGGGGT
TTCTTTCAAGTTATCAATCATGGTATCCCCGTCCCCGTCCTAGACGAAATGTTGCGTGGGGCACGACGTTTTCACGATCAAGATATCGAC
GTTAAAAAGCCATACTATAGTCGAGATATTGCAAGGAAAGTTATGTACAATTGCAATTTTGATCTATTTAGTGAGAAATCTCTTGCAGCA
AATTGGAGAGACTCACTTTACTCTGTCATGGCTCCTAATCCTGCTACTCCCGAGGAAATCCCCGAGACATGCAGGGAAATCACAATTGAG
TACTCAAATTATGTGATGAATTTGGGATACACATTGCTTGAATTATTTTCAGAAGGACTTGGTTTAAAACCAAACCATCTCAAAGAAATG
GGATGTGCTGAGGGACTAGGCATTTTGTGCAATTACTACCCTAAATGTCCACAACCAGAAATTGCAATTGGCACAAGTAGACATGCTGAT
AATGATTTTTTCACAGTGCTTTTGCAAGATGATATTGGTGGACTTCAAGTTCTTCACAAGAATCAATGGGTTGATGTTCCTCCTACTCAT
GGAGCTTTAGTTGTCAATATTGGTGACATTCTTCAGCTTATATCGAATGACAAATATAAGAGCGTAGTTCACAGAGTATTGGCAAATACA
ATTGGTCCAAGAATATCAATAGCAAGTTTCTTCAGCACAGGGCCATTTTCAACTTCTAGAATTTATGGACCAATTGAGGAATTATTATCA
AAAGATAATCCTCCAAAGTATAGATCAACAACAATGAAGGACTTCTTTGAATATTCTAATAAAAAAGGACTTGATGGCAATTCTAATTTG
TCTCACTACAAAATAATATGAATTTTGATATGTTGGAGTAAAAATAATGTTTTTTTTTGTTTAACCAAAAAAAAAAAAGATTATCTACCT
TAAGAATAAAAAGATGTTGCATTTGTACTTTTGTATTTGTTTTTGTTTGATATAAGAAATAAGAATGTGAGATTATTTATTAAAAAAAAA
A

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (7)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	11
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	5
Solanum lycopersicum	cLEM	fruit immature green fruit	4240	2
Solanum lycopersicum	cLER	leaf 4 weeks	5127	1
Solanum lycopersicum	cLES	leaf 4 weeks	5243	3
Solanum lycopersicum	cLEX	root fruit-set stage/post-fruit loading	3142	1
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	1

mRNA member sequences (24)

Alignment image suppressed for unigene with 24 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (10)

Annotations (manual: 3 | blast: 2 | go: 0 )

Protein prediction analysis (1)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	13	2OG-FeII_Oxy	479
2	21976	2OG-FeII_Oxy	385
5	56269	2OG-FeII_Oxy	197

Preceding Unigenes (1)

Unigene	Build
SGN-U144451	Lycopersicon Combined #2

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
Event Type:
Event Description:
Event Web URL:

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