Sol Genomics Network

This unigene is from an out-of-date build, Lycopersicon Combined #3
It has been split into SGN-U577582 and SGN-U577760 in the current build, Tomato 200607 #2

Unigene SGN-U215542

Unigene Basic Information

Unigene ID:	SGN-U215542
Unigene Build:	Lycopersicon Combined #3
Date:	2004-06-30
Organism:	S.lycopersicum S.habrochaites S.pennellii
Alternative ID:	215542
mRNA sequence:	Length: 1232 bp

>SGN-U215542 Lycopersicon Combined #3 (22 members)
TTTGACAGTAGCGAGAATAGGGATTAATCAGTGTGGATCGGTGTTGGGGGATTGAAGGACGGTAGCAGGGGAGTCATGGACCCTGCAGCT
GTCGATAGGATTATTGAGAAGCTATTAGAAGTTCGATTATCGAAGCCTGGCAAGTTGGTGCAGCTTTCCGAGTCTGAAATCAAGCAACTA
TGTGTTTCCTCTAGAGATATCTTCGTTAAACAGCCAAATCTACTTGAACTTGAAGCACCCATCAAAATTTGCGGTGACATTCATGGGCAG
TACAGTGATCTGTTGAGGCTTTTTGAATATGGTGGTTTTCCTCCGAAGGCTAACTACTTATTCTTGGGTGATTATGTAGATCGTGGGAAG
CAGAGCTTGGAAACAATATGCCTCTTGCTTGCCTATAAGATCAAGTATCCTGAGAACTTTTTCTTGCTTAGAGGAAACCATGAATGTGCT
TCTATAAATAGGATATATGGATTCTATGATGAGTGTAAGCGTCGGTTCAATGTGAAACTATGGAAGTCCTTTACAGACTGTTTTAATTGT
CTTCCTGTAGCAGCACTTATCGATGAGAAGATATTATGCATGCATGGGGGTCTGTCCCCTGATCTTTCTAGTTTGGATCAGATTCGGAAC
TTACCACGTCCAACTGCCATCCCGGACACTGGTTTGCTTTGCGATTTACTTTGGTCAGATCCTGGTAAAGATGTAAAGGGTTGGGGGATG
AATGATAGGGGAGTTTCATACACCTTTGGTCCTGATAAAGTTTCTGAGTTTTTGTCAAAGCATGACTTGGACCTTGTCTGTCGTGCCCAT
CAGGTCGTGGAGGATGGTTATGAATTCTTTGCTGACAGGCAGCTTGTCACCATTTTTTCAGCTCCCAATTACTGCGGCGAGTTTGACAAT
GCTGGTGCTATGATGGGTGTTGATGAAAACTTGATGTGCTCTTTCCAAATTCTTAAGCCAGCAGAGAAGAAAAATAAGTTTATGATGTGA
GAAGATGTTTCCTACTTTTATAGAGGTCACCTTCTTCTCTGTCCTTGACATATAATGGATGCTGAGTTGAATATAGCTGTCCCTCTTGTT
TTATTATTACTCAAGTTCTAGTGATTCGGGAGGATGTACTTGTTAAAATCCATTTCAGCAACATTTGTGGTTCAAGTTTAAAACAAAAAC
CATACGTGGGTGTTTTTCAGTGAAATTATTGGGAGGAAATCTTTTTCAAAAAAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (11)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	10
Solanum lycopersicum	cLEB	vegetative shoots including meristems and small expanidng leaves 8 weeks	898	1
Solanum lycopersicum	cLEF	fruit pericarp mature green	5317	1
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	1
Solanum lycopersicum	cLER	leaf 4 weeks	5127	1
Solanum lycopersicum	cLES	leaf 4 weeks	5243	1
Solanum lycopersicum	cLEW	mixed roots grown under different nutrient and mineral difficiencies 4-8 weeks	3175	3
Solanum lycopersicum	cLEX	root fruit-set stage/post-fruit loading	3142	1
Solanum lycopersicum	cTOB	developing flower buds and flowers 3-8mm flower buds from full grown plants	5524	1
Solanum lycopersicum	cTOC	developing flower buds and flowers 8mm to pre-anthesis flower buds from full grown plants	5759	1
Solanum habrochaites	cLHT	leaf trichomes 4-8 weeks old	2457	1

mRNA member sequences (22)

Alignment image suppressed for unigene with 22 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (4)

Annotations (manual: 1 | blast: 2 | go: 1 )

Protein prediction analysis (1)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	92	T_phtase_apaH M-ppestrase	137
2	22026	T_phtase_apaH M-ppestrase	128
5	56448	T_phtase_apaH M-ppestrase	41

Preceding Unigenes (1)

Unigene	Build
SGN-U146458	Lycopersicon Combined #2

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
Event Type:
Event Description:
Event Web URL:

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