Sol Genomics Network

This unigene is from an out-of-date build, Lycopersicon Combined #3
It has been superseded by SGN-U571799 in the current build, Tomato 200607 #2

Unigene SGN-U215895

Unigene Basic Information

Unigene ID:	SGN-U215895
Unigene Build:	Lycopersicon Combined #3
Date:	2004-06-30
Organism:	S.lycopersicum S.habrochaites S.pennellii
Alternative ID:	215895
mRNA sequence:	Length: 1244 bp

>SGN-U215895 Lycopersicon Combined #3 (20 members)
TCTGCTATTTTTTCTCCGATCGAAGATCAACTATTCCGATTTCCGACGATGAATGTGATGGATTCAGCTCCGGCTAAAAGTAGCTTAATG
AGTCCCGAATCTGATATTCAGAGAACACAGTTTCCATATGTGACTGGGACATCAGTTGTCGGCATCAAGTACAAAGATGGTATTCTCTTG
GCAGCTGACATGGGAGGTTCCTATGGTTCAACGATACGTTACAAGAGTGTGGATCGATTAAAGCCAGTGGGAAAACACTCCCTTCTTGGT
GCAAGTGGTGAAATAAGTGATTTTCAGGAGATAATGAAGTACCTTGATGAGCTTATCTTGTATGACAACATGTGGGATGATGGGAACTCC
TTGGGTCCCAAAGAAGTGCATAACTACCTAACACGTGTGATGTATAATCGTCGCAACAAGTTCAACCCACTTTGGAATTCACTTGTTCTT
GGTGGAGTAAAAAATGGACAGAAGTATCTTGGAACAGTTAGTATGATTGGTGTGCATTACGAGGACAACCATGTGGCTACTGGATTTGGG
AATCATCTTGCGAGGCCCATTCTTCGTGACGAATGGCATGAAAATTTGAGTTATGAAGAGGGCGTTAAGTTATTGGAGAAATGTATGCGT
GTGCTTTTGTATCGAGACAGATCTGCAGTCAACAAGCTTCAGATTGCAAAAATCACAGAAGAGGGAGTAACAATTTCTCAGCCATACTCA
TTGAAGACTTTCTGGAACTTCTCTGCTTTCCAGAATCCAACCGTTGGTGCTGAGGGTTCATGGTAATAACTGATTGCTGCGTCGACTAGG
TTTGATGAAGGAACTACACAATGTGTTGCAGATTATAGAACTGTTTTCATGGAAGTGATGTTTGATAGAACTCGTGTAATTTGAATTGTC
TATGGTCTTTCTAGGTTTTTTCCTAATGTAAACTATAAAAGACATGTCTCCTGATGTTTCACTTTTCCTTCACTATGTGAGATTGTTATC
TTCCAAAGTTACTTGGCATGCCATGGCTCATCTCAGTTATGGAACGTGGTCGTTTTTCGCCTGGTTGATATATTTTCTAAGTTCATACAG
AAGTACACGCCCCTGGTTTACCTACTTTTAAGTTGCGTTGCTTGGACTCTTGACAATTTTGTCACATTCAAGTGTTTGATCCTCTAAAAA
TGCTCTATTTTTGGAGGATCAACATAGTCGGAGACATCTTTTTGAAGAGTTTGAGCTATGTTATCGACACTTAT

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (9)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	cLEF	fruit pericarp mature green	5317	1
Solanum lycopersicum	cLEI	whole seedlings germinating seed	3927	2
Solanum lycopersicum	cLEL	developing flower buds and flowers anthesis-stage flowers from full grown plants, 4-8 weeks old	11276	2
Solanum lycopersicum	cLEY	root pre-anthesis/pre-fruit loading	3259	1
Solanum lycopersicum	cLEZ	root germinating seedlings	2373	2
Solanum lycopersicum	cTOB	developing flower buds and flowers 3-8mm flower buds from full grown plants	5524	2
Solanum lycopersicum	cTOC	developing flower buds and flowers 8mm to pre-anthesis flower buds from full grown plants	5759	1
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	1
Solanum lycopersicum	cTOS	suspension cultures	8026	8

mRNA member sequences (20)

Alignment image suppressed for unigene with 20 aligned sequences.
[Show Image]

Markers Information (1)

Expression Data (0)

Annotations (manual: 0 | blast: 2 | go: 4 )

Protein prediction analysis (1)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	99	Peptidase_T1	128
2	25592	Peptidase_T1 Pept_T1A_subB	6
5	59586	Peptidase_T1 Pept_T1A_subB	6

Preceding Unigenes (1)

Unigene	Build
SGN-U146109	Lycopersicon Combined #2

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
Event Type:
Event Description:
Event Web URL:

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