Sol Genomics Network

This unigene is from an out-of-date build, Lycopersicon Combined #3
It has been superseded by SGN-U562629 in the current build, Tomato 200607 #2

Unigene SGN-U217025

Unigene Basic Information

Unigene ID:	SGN-U217025
Unigene Build:	Lycopersicon Combined #3
Date:	2004-06-30
Organism:	S.lycopersicum S.habrochaites S.pennellii
Alternative ID:	217025
mRNA sequence:	Length: 1239 bp

>SGN-U217025 Lycopersicon Combined #3 (11 members)
TGGAAAGGAGGAGAAGAGAGCGGCACACGTAGTTACGCTTCAGACCTCAAAATTTCGACTGAAAAAGCAGTTACACAAAGAGAAGAGAAG
AAGAACGAAAACAAATAACGAAGAAAATTATGGGATCGACTGATTCAGAATTGGATTCAATTTTTCAGGATAACAAGCGTCATCGTAATC
GTCTTGTTCCGATCGGTGGCTCAGCCGCTACGATGTGGTAAATCCGCAGTCTCATCTGCAAGAACAGCCCAACGCAATGTAGTAGCATGG
CTCTACCACAAGGCATTAAGCTTACAATTGAACCAGCAACTCTTTTTCAAGTTTCCTCGTTCATTTGCTCCCCACCTTCCTAAATTTGCT
TTCAGTTTTCAAGTTTTACCCTTTAGGCATGTTTTGAACATTATATAGGACTTGTTTCAAGGTACAGGATGTTACAGATTACTCTAGGCG
TATATGTCAATGATGGTAATTCAGCCTCGTTAATTGGATCAATAGCTGTTATTAACTTATGCTATATATATAACTTTATAGGTTGGGCTT
GAGCTTAAATGTGATAACCAACTTCTCCTATTTCCAGAAAAAGCAATAATGCAACTTTGCAAAACCTTGTCTGATTAACTGTATGGAGTG
TTCGTATATGTTTATGATTATAAGGCGAGGTCATTTGGTCTTCTGTTATGAATTCTTGAGAAGTGATGCATTTTCTGCTGCCTTACTTTC
CTGTGAGATATCGTTCATGTTAATCTTCCCAATCCCGGTTGATCCTCCACTGTTTCAATTTTTTGGCTAAATTGTCTCTGAACACTCTCA
ACTCATATTCTGTTTGTGCAATTTATGACTTTGCGAAATTTCAGGTGCATTTCTCACTGCAGGAGTGCTCACTGCCGGACTCATTAGTTT
CAAGCGGGGAAATTCTCAATTAGGTCAGCAACTAATGAGAGCTAGAGTTCTTGTTCAAGGTGGTACAGTCGCACTGATGGTTGGTTCAGC
ATATTACTATGGAGATAATTTCAAGCGCGCTGGATGACTGACTGACTGACTACCAAACGACTCCCTCATTCGTCTGTCATGAGTTGATTT
TCTGCTGGGAAAAAATGATTCCATATCTTGCTAGGATGCAGTTTCTTTACATGGCTGTCATTGCCACCCCAATCACATAAGAAAGAAAAT
GTAGAGGAAAAAGTAATAACAGAGTGATAACATAATGATAATGTTTATGTATTTTTCAAAATTTATGGG

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (8)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	2
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	2
Solanum lycopersicum	cLEM	fruit immature green fruit	4240	1
Solanum lycopersicum	cLEW	mixed roots grown under different nutrient and mineral difficiencies 4-8 weeks	3175	1
Solanum lycopersicum	cTOB	developing flower buds and flowers 3-8mm flower buds from full grown plants	5524	1
Solanum lycopersicum	cTOD	flowers anthesis-stage flowers from full grown plants	5642	1
Solanum lycopersicum	cTOE	Crown gall crown galls from full-grown plants (4-8 wks old)	5204	1
Solanum lycopersicum	cTOS	suspension cultures	8026	2

mRNA member sequences (11)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (2)

Annotations (manual: 1 | blast: 2 | go: 0 )

Protein prediction analysis (1)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	2589	Znf_PHD HIG_1_N Znf_ring Cyt_b559_beta	7
2	25085	Znf_PHD HIG_1_N Znf_ring Cyt_b559_beta	7
5	59685		6

Preceding Unigenes (1)

Unigene	Build
SGN-U147084	Lycopersicon Combined #2

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
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