Sol Genomics Network

This unigene is from an out-of-date build, Lycopersicon Combined #3
It has been superseded by SGN-U563075 in the current build, Tomato 200607 #2

Unigene SGN-U217718

Unigene Basic Information

Unigene ID:	SGN-U217718
Unigene Build:	Lycopersicon Combined #3
Date:	2004-06-30
Organism:	S.lycopersicum S.habrochaites S.pennellii
Alternative ID:	217718
mRNA sequence:	Length: 1366 bp

>SGN-U217718 Lycopersicon Combined #3 (10 members)
AAGAGTGCAAGGGAGCTCATTTTGCGGCTCCAGAAGATTGATGGTGATAATTATCCCGAGACGCTTAATCAGATGTTCATAATCAACGCC
GGGGCTGGGTTTAGGCTTCTCTGGAATACTGTTAAGAGTTTTCTGGACCCCAAGACGGCCTCCAAGATACATGTTCTTGGGAACAAGTAT
CAGAATAAATTGCTTGAAATAATTGATGCTAGTGAGTTGCCAGATTTCATAGGTGGTAGCTGTACATGTGCAGATCGAGGAGGTTGCATG
CGTTCAGATAAAGGACCATGGCAAAATCCAGATATATTGAAGATGATTGGTGAAGCACGACGTGCCAAGCAGCTTGTTAAAGTTCTAAAT
AGTGAAGGAAAGATAGTTTATGCTAAGCCTCGCTACCCAACGGTGAAAGGTAGTAGTGACACCTCTACTGCTGAATCTGGATCTGAAGCT
GAAGATATTGCTTCCCCAAAAGCTTTAAGGAGTTATTCACATCTCCGGCTTACTCCTGTACGAGAAGAGGCTAAGACTATTGGAATGCCT
GGCTACACGTCAAACTTCCCAGGATATGATGAATATGTTCCCATGGTTGACAAGGCTGTTGATTCTGCATGGAAGAAGGAACCATCCCTT
CACAGACCCTCCACACCCAAAGTGATGCTTCCACCAGCAAGCTCTGAAAAGCCTGTAGAAGGTCTTCATGCTCGAGTTTTAGGACTTCTT
ATGGCCTTCTTCATGACTGTCCTGATGCTTTTCCGCTCAGTTACATGCCGTGTTACCAAGAAACTTCAAGATGTATCGACTGTTGAGAAC
CAAGATATTCAAGACTTCACTTTTGATGCTAGCCCTAAAGAAGAGTTTCGACCCCCTTCACCTACTCCAGCCTTTACAGAAGCTCAACTG
CTCTCCGTTGTTCTCAAGAGACTGGGCGAACTTGAAGACAAAGTAAATACTCTTCAAGAAAAGCCATCTGAGATGCCTTATGAAAAGGCG
GAATTGCTAAATGCAGCTGTTTGCCGGGTGGATGCCCTAGAAGCTGAGTTAATAGCAACCAAGAAGGCATTACATGAGGCATTGATGAGG
CAAGAAGAACTTCTCGCTTACATTGACAGTCAAGAAGCTGCCAAGTTCCAGAAAAAGAAGAAGTTTTGCTTTTAAGATGGACGATGGTTC
AGGACAGGGATCTCGGATTTTCCACTGTAGTATCTCGAATGAGATATATATTTGTAATGTGTTGTCAATACTCCCAGTCATTGTGCAGTG
CATCTGTGTTAAGTTTTTCCTTTTTGGATCGTGTATTTCATTTACAAAATGAGGTGAACACTTGCTCATAATGTGAAAAATTATAGTTTC
TTTTNNNAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (6)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	1
Solanum lycopersicum	cLEN	fruit pericarp red ripe to over-ripe	3979	1
Solanum lycopersicum	cLEW	mixed roots grown under different nutrient and mineral difficiencies 4-8 weeks	3175	1
Solanum lycopersicum	cLEX	root fruit-set stage/post-fruit loading	3142	3
Solanum lycopersicum	cLEY	root pre-anthesis/pre-fruit loading	3259	2
Solanum lycopersicum	cTSC	seed	2256	2

mRNA member sequences (10)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 2 | go: 0 )

Protein prediction analysis (1)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	72	CRAL_TRIO_C	165
2	22195	CRAL_TRIO_C CRAL_TRIO_N	47
5	56460	CRAL_TRIO_C CRAL_TRIO_N	40

Preceding Unigenes (1)

Unigene	Build
SGN-U148343	Lycopersicon Combined #2

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
Event Type:
Event Description:
Event Web URL:

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