Sol Genomics Network

This unigene is from an out-of-date build, Lycopersicon Combined #3
It has been superseded by SGN-U578976 in the current build, Tomato 200607 #2

Unigene SGN-U218156

Unigene Basic Information

Unigene ID:	SGN-U218156
Unigene Build:	Lycopersicon Combined #3
Date:	2004-06-30
Organism:	S.lycopersicum S.habrochaites S.pennellii
Alternative ID:	218156
mRNA sequence:	Length: 1252 bp

>SGN-U218156 Lycopersicon Combined #3 (11 members)
CAGCGAAATTGAGTACCTATTGAAAAATGGATGGGTTCCTTGCTTGGAATTCGAGACTGAGCACGAAAAAAGCTTCTCACAAAGCTCCAG
TTTACTGCTACAACAATGGCGTCTTCCATTAACCTACTTATCTCTCCACCAAATTCACAATACTCATTCTGTTCTCGCAATTCACTTCTC
TTCTCTCCTTCAATTACAACATTTCGACGAACTCTTCCATCGAAATCGCTATCAATTTCAGCTTCAGCTTCTTCGACGAGAGCATTGGAA
GCTCTGATATTCGATTGTGATGGCGTAATTTTGGAATCTGAGCATCTTCATCGCCAAGCGTATAACGATGCTTTCTCTCATTTCAATGTG
CGATGCCCTGATAATGATGATAAGCCCCTGAATTGGAGCCTTGAGTTTTATGATGTGCTGCAGAATCAAATTGGAGGTGGAAAACCTAAA
ATGCGATGGTATTTTAAGGAGAATGGTTGGCCTACTTCAACAATCTTTCAGCATTCTCCGGAGGATGACAACGATAGAGCCAAGCTGATT
GATACTCTTCAAGATTGGAAGACTGAGAGGTACAAAGAGATAATCAAATCTGGAACTGTTGAGCCGAGACCAGGAGTTTTAAGATTGATG
GATGAGGCCAAGGCTGCTGGCAAGATGCTCGCCGTCTGCTCTGCTGCAACCAAAAGTTCAGTTGTACTGTGTCTTGAGAATCTTATAGGA
CTTGATCGATTCCATGGTCTTGATTGCTTCCTTGCAGGTGATGATGTGAAAGAAAAAAAGCCTGATCCTTCAATATACATTACAGCTGCC
AAGAAACTTGGCGTCTCAGAAAACAATTGTTTGGTGGTAGAGGATAGTGTCATCGGGCTACAGGCTGCAACCGGAGCTGGAATGTCGTGT
GTTATAACCTACACTTCATCTACCGCGGATCAGGATTTCAAAGAAGCTATAGCAATCTATCCTGACTTGAGTGATGTTAGGTTTAATGAT
TTAGAGTCACTGGTCGCGAAATAGGATAGAGGGACGGGTCCATTATGCAGAAGAGTTTCGAAGCTGAACAACAGAGTCCTTTAGTATCTG
AAATGAAGTTTTGGCAAGCTTGTATCATTTTTTAGTTCTAAAATAAACTGTTCATAATTATTCATTTTGTGTAAAATAAAGAGTTAATCA
CATCACATTCATAGTATATGTCAATATAATGTAATCTTATTTTCAGTTCCAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (6)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	2
Solanum lycopersicum	cLER	leaf 4 weeks	5127	2
Solanum lycopersicum	cLES	leaf 4 weeks	5243	1
Solanum lycopersicum	cLET	leaf 4-6 weeks	9135	3
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	2
Solanum lycopersicum	cTSC	seed	2256	1

mRNA member sequences (11)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (2)

Annotations (manual: 1 | blast: 2 | go: 2 )

Protein prediction analysis (1)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	237	Hydrolase HAD-SF-IA-v3 PGP_bact	64
2	25458	HAD-SF-IA-hyp1 Phosphonatase HAD-SF-IIIA AHBA_synth_like Hydrolase HAD-SF-IA-v3 HAD_SF_A_v1 PGP_bact HAD_II	6
5	59467	HAD-SF-IA-hyp1 Phosphonatase HAD-SF-IIIA AHBA_synth_like Hydrolase HAD-SF-IA-v3 HAD_SF_A_v1 PGP_bact HAD_II	6

Preceding Unigenes (1)

Unigene	Build
SGN-U148370	Lycopersicon Combined #2

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
Event Type:
Event Description:
Event Web URL:

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