Sol Genomics Network

This unigene is from an out-of-date build, Lycopersicon Combined #3
It has been superseded by SGN-U580889 in the current build, Tomato 200607 #2

Unigene SGN-U225529

Unigene Basic Information

Unigene ID:	SGN-U225529
Unigene Build:	Lycopersicon Combined #3
Date:	2004-06-30
Organism:	S.lycopersicum S.habrochaites S.pennellii
Alternative ID:	225529
mRNA sequence:	Length: 1456 bp

>SGN-U225529 Lycopersicon Combined #3 (15 members)
AAAGACATACCCAAACCGAAGGGAATCGAAGACCTTGTTCTTCAACGACGAAAACACAACCTCCATATAAACACTTTGTCTGTTTAATCA
ACAGAAAAGTCAACTGGTACGCATACCCATATCATTGAACACTTTGGTAATACTGCAAGGTTGTCTGTTTTAGGGATTATATAAAATTGA
TGTTAATTAGTAGAGGAGTAGTTACTTTTTATGGATAACTTATGCTGCTTCAGTTCTGCTAATTCTCAGCTTGCAGGAGGACGGTCATCA
GGTGGCAAAGGAAGAAGCCATCAAGGGCCTGCCAAGTATGGGTTCACCCTGGTTAAGGGGAAAGCAAATCATCCAATGGAGGATTATCAT
GTTGCTAAATTCATGCAGTTGCGCAAAGGGGAACTAGGACTTTTTGCTATTTATGATGGGCATTCAGGAGACAATGTGGCTGCCTATTTA
CAGAAACATTTGTTCTCCAATATCTTAAAAGAGGAGGATTTTTGGACCGACCCTCATAGCTCAATCTTACAAGCTTACGAGAGAACAGAT
CAGGCTATTCTCTCACATAATCCTGATCTAGGACAAGGAGGGTCGACTGCAGTGACTGCAATACTTATAAATGGGCGAAAGCTATGGATA
GCAAATGTTGGAGATTCCAGAGCAGTGCTTTCAAAGAGGGGGAAGGCGATACAAATGAGCATTGATCATGAACCACACACAGAGCGGGGA
AGCATTGAGAACAAAGGTGGCTTTGTCACAAAAATGCCAGGAGATGTTGCTAGAGTGAATGGTCAACTAGCTGTATCTCGCGCTTTTGGA
GACAAGAACCTGAAATCACACTTGCGCTCTGATCCTGATGTAACAACCATTGATGTTGATGGAGATACAGATCTTCTCATCCTTGCAAGT
GATGGCCTATGGAAGGTAATGTCTAATCAAGAGGCAGTTGACATCGCGAAGAAGGTTAAGGACCCACAGAAGGCATCCAAGCAATTAGCC
ATCGAAGCGTTAACTAGAGAAAGTAAAGATGATATCTCATGCATCGTTGTCCGATTTAAGGGGTAAGTGAATGATGACTAGTGTGCAGAA
GTTAAAACTCTATAGTTGTAAGAATGAGATTCAACTCCTAGTTTCATAGAAGCTTGAAATCTCCAGAATCCAGCATAAGTATTTGTATTT
ATACATGTACGATCCCTTGCCCCTTGTTTGTAATTTTCAAGTTGTTCATTCAGTTTGTGTGGTAATTATCTTTTTTTTTCCTACTAATAG
ATTAGATTCTTGAGGATTGAATTTTGTGTAATTTGCATAAATACTTGCTTTTGTAAGCAAAACATTTCTTGGTGTAATCATGATAATGGT
CAAGGCAAACCTATACTGTATGTGTATGATTGTATATATAAGCTGGTCTGTTGTTGACATAAGAAGGTTAACATTGACAGACTCAGAAAA
AAAAAAAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (9)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	2
Solanum lycopersicum	cLEN	fruit pericarp red ripe to over-ripe	3979	1
Solanum lycopersicum	cLEW	mixed roots grown under different nutrient and mineral difficiencies 4-8 weeks	3175	1
Solanum lycopersicum	cLEX	root fruit-set stage/post-fruit loading	3142	1
Solanum lycopersicum	cLEY	root pre-anthesis/pre-fruit loading	3259	1
Solanum lycopersicum	cTOA	developing flower buds and flowers 0-3mm flower buds from full grown plants	6259	2
Solanum lycopersicum	cTOC	developing flower buds and flowers 8mm to pre-anthesis flower buds from full grown plants	5759	3
Solanum lycopersicum	cTOE	Crown gall crown galls from full-grown plants (4-8 wks old)	5204	1
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	3

mRNA member sequences (15)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 2 | go: 1 )

Protein prediction analysis (1)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	22	PP2C-like	349
2	21995	PP2C-like	211
5	56547	PP2C-like	33

Preceding Unigenes (1)

Unigene	Build
SGN-U155571	Lycopersicon Combined #2

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
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