Sol Genomics Network

This unigene is from an out-of-date build, Lycopersicon Combined #3
It has been superseded by SGN-U580833 in the current build, Tomato 200607 #2

Unigene SGN-U225542

Unigene Basic Information

Unigene ID:	SGN-U225542
Unigene Build:	Lycopersicon Combined #3
Date:	2004-06-30
Organism:	S.lycopersicum S.habrochaites S.pennellii
Alternative ID:	225542
mRNA sequence:	Length: 1231 bp

>SGN-U225542 Lycopersicon Combined #3 (15 members)
TGAATCTTGACCTCGCGATATATTTTATTTACTTTTCTTCATTCGCTCTGTCCTCTCTCTTCTCTGTTTCTGTAGTAGCCATGTGTGTGA
TTTCAGAAGAATCCATCGCTCAGTTTGAAGCTTTAATGGAACAAGTTGATGAATCACTCAAAACTACTTTTCAGAATGTTCATCAAGGTT
GTACAAGGGATACATATCTGCGGTTCCTAATAGCAAGAGAGGGAAATGTTGCAAATGCTCATAAAATGTTGGTTGATTCTTTGAATTGGA
GAGTCAAAAATGAGATAGATGATATTTTATCGAAACCTATCATTCCTACTGAGCTTTACAGATCAATTCGTGATTCTCAACTAATAGGAA
TGCCAGGTTACACGAAAGAGGGCCTTCCAGTATTCGCTTTTGGTGCAGGACTCAGCACATATGATAAAGCATCGGTCCATTATTATGTGC
AATCACACATTCAGTTCAATGAATATCGCGATCGTGTAATTCTGCCTGCTGCAAGTAAGAAGTATGGGAAACGTATCAGCAAATCTCTGA
AGGTTTTAGATATGACCGGCTTGAAACTTTCAGCTCTAAACCAAATAAAGCTATTGACTATAATTTCCTCAATTGATGACCTTAATTACC
CGGAGAAGGTAGTTGCATACTACATTGTCAATGCTCCCTATATCTTTTCAGCCTGTTGGAAGGTAGTCAAACCTCTTCTACAGGAGAGAA
CCCGAAAAAAGGTTCAAGTTTTATCAGGTTGTGGACAGGATGATCTATTGAAGATCATGGACTATTCGTCACTGCCCCATTTTTGCCGGA
GAGAAGGTTCTGGATCTTCCAAATACTCAGGCAGCTCAAGTGAAAATTGTTATTCCCTGGATCATCCATTCCACCAGCAACTTTATGATT
ACATAAAGCAGCAGGCATTGCTTCGCAGACCTGTTCGGCCAGTTAAACAGGGCTCTGTCCATGTGGATTTTCCTGATGCTGTCACTGAGG
GGACTGAGTTTGTTCAGACGTTGGCATCAGAATTTCAAAAGTTCGGTAAGCAAAATGGACTTTCTCAATCACTAGATGATCTTAATATCA
ATGATCATCAAGCATAGATAATAAGAGTTTGGGTCATTATGCACTCGCTGACAATTCTGGATTCTCATGCAAGTACAGTATTAATAGCTC
GAGCAGTATAGCAGAGGTTTTCTCCTAATTAGACGCCTCACTCAAATTTTATATGTTATAG

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (9)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	1
Solanum lycopersicum	cLED	ovary 5 days pre-anthesis to 5 days post-anthesis	9878	1
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	3
Solanum lycopersicum	cLEL	developing flower buds and flowers anthesis-stage flowers from full grown plants, 4-8 weeks old	11276	2
Solanum lycopersicum	cLEM	fruit immature green fruit	4240	2
Solanum lycopersicum	cLEW	mixed roots grown under different nutrient and mineral difficiencies 4-8 weeks	3175	1
Solanum lycopersicum	cTOB	developing flower buds and flowers 3-8mm flower buds from full grown plants	5524	3
Solanum lycopersicum	cTOE	Crown gall crown galls from full-grown plants (4-8 wks old)	5204	1
Solanum lycopersicum	cTSB	seed	1880	1

mRNA member sequences (15)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 1 | blast: 2 | go: 0 )

Protein prediction analysis (1)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	72	CRAL_TRIO_C	165
2	23834	CRAL_TRIO_C CRAL_TRIO_N	10
5	57905	CRAL_TRIO_C CRAL_TRIO_N	10

Preceding Unigenes (1)

Unigene	Build
SGN-U155583	Lycopersicon Combined #2

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
Event Type:
Event Description:
Event Web URL:

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