Sol Genomics Network

Unigene SGN-U268176

Unigene Basic Information

Unigene ID:	SGN-U268176
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	268176
mRNA sequence:	Length: 1921 bp

>SGN-U268176 Solanum tuberosum #4 (14 members)
GTTTAGACCTAAAAGGGAGTCGCCGTTGACACTGTATTCGGAAGAAGAGGGCAAACTATGGGGGAAATGGCAGAGAATGACGAGTTTTAC
CTGAGATATTACGTGGGTCACAAAGGAAAATTCGGTCACGAGTTCTTAGAGTTTGAGTTTAGGCCTGATGGCAAGCTCCGTTATGCTAAC
AATTCCAACTACAAGAACGATACAATGATTCGCAAGGAAGTCTTCCTTACCCCTTCTGTTCTCAAAGAATGCCGCCGCATTGTTGCTGAT
AGCGAGATCATGAAGGAAGATGATAACAACTGGCCGGAACCAGATAGAGTTGGTAGACAGGAACTTGAGATTGTGATGGGAAATGAACAC
ATATCATTCACTACATCTAAGATTGGTTCATTAATGGATGTGCAGACCAGTAATGATCCCGAGGGACTTCGTATCTTCTATTATCTTGTT
CAGGATCTGAAGTGTTTTGTGTTCTCTCTCATTTCGCTCCATTTCAAGATTAAACCCATTTAACTCGTTCTTATGGCGTATGCTAAACGT
TAGCTGGATGTGCTCAGCCTCATGTTTTGAATGTGTTGAATTGTGTATCAAAAGAGATGGTGCCGTTTGATGGTGTTCTGTTTTTTTTAA
ATGTGTGGACAAGTCTTTGTAGACGTTGTTTTGTGAGTAAAGATAACTGTTGTGTGCTCTTTACCATCATCTATCTGCATATGTTTGTCG
AATCTATCGCTGTATATTTAGTTGGTCATCTCTGTGACAATCAGCACAATCAGTTCCTCTTCACTCTATGGGAGGATTTTGGAGAAATAG
AAGGACACCAAATTTCCTCAAAAATGGCAACAGAGACAGATCTACTTGTAATCCTTGGAAGAAGTATAGGAATCTCTACTTATCAAGCCT
GTCACTGCAGACTAGGTACAACTCCACAGTACAGCTGAATCCAAATTATCCCCAAGCAGTTGCACTCCTCAACTGCCACCCCTTCTGGCC
AACAACTTTTCTCTATTGGAGAAATCTCATCAGCACCTTCCATGGGAGTCTTTTATGCTCAAGCAGAGATGGCCATATTAGATGAGTTCC
AAGACTTCTGTGTGCTTGAATGCTCAGTATGCAAACAGAAGAAGCGAACAAAGGATAGAAAGGATTTTGACTGTCCAAGATGCAATCGGA
AAACATCATTAGTCCCTCGCTGTAGCTTCCAAATTGATCTTATTGACAATACTGCTACAACCACAGCATCTATCTCTGCTGAATTAGGAA
AAAAGTTGCTTTCCATGACAGCAGAAGACATATTTGACATAACTTGCACTAAGCGACAATCATTGTCTCTTAATCATGTCCATGACATGC
TGTCAAACACAACATTCGAAATTCAGCTAAGGAAGTCATCTTGGAGCAGCTCCAATACAACAAATGCAACTTTGTCCATTCTTTCCTACA
TGGAAAAACCCCATACTGCATTGGGCACTACAGATAGGACTTCTAAAAAAATCAAGCCTTTGGAAATAACTGAAGTAGAACTGATGCCAA
CAACTGCTGCAGCTGGTCCTTCAAATGCACCTGCAAAATTTGAACCACCCACACCTACCAAAAAGGTGTAAAAGGAACTACGTCACACCA
TTTTGTCACTCTTGCTTATCCTAGGGACAATATAATCACTCACTGTCCCTCAACTCTGGTTTTTTGCATCAGCAAGATTACCTACGCACA
GGCAAACTGCTGTGTCCTCTACATATGCTACACCATCCCACGCTAATCTTATCTGCGTAAACTGCAACATGTGCTATATTATTTTGTTTA
TATTACATTCGTTAGTATGTACAAATCGTTAAACTTGACATCGCTGTTTTGTCTATTGTACATATTCTACATATTTCTATTAGTACCTAA
TATAATAGATTATATTATCTAAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (6)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	CSWB	Tubers	6124	1
Solanum tuberosum	STM	mixed tissues	14805	6
Solanum tuberosum	TUBS	Tubers	5976	1
Solanum tuberosum	cPRO	roots in vitro grown stem cuttings	10187	3
Solanum tuberosum	cSTA	Axillary buds of stemp explants; swelling stolons; growing stolons; growing sink-tubers 1 to 3 days (plates 1-20), 4 to 6 days (plates 21-40), 7 to 10 days (plates 41-60)	10537	2
Solanum tuberosum	cSTB	leaves and petioles 8 weeks old plants	10327	1

mRNA member sequences (14)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 2 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	217	Mago_nashi	69
2	22225		43
5	87395		1
1.1	101401	Nucleic acid-binding OB-fold - Molecular Function: nucleic acid binding (GO:0003676)	283
2	118596	Mago nashi protein - Cellular Component: nucleus (GO:0005634) - Biological Process: sex determination (GO:0007530)	45
5	131590	Mago nashi protein - Cellular Component: nucleus (GO:0005634) - Biological Process: sex determination (GO:0007530)	6

Preceding Unigenes (1)

Unigene	Build
SGN-U243161	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
Event Type:
Event Description:
Event Web URL:

SGN is supported by , and hosted at
Cite SGN using | Disclaimer