Sol Genomics Network

Unigene SGN-U268181

Unigene Basic Information

Unigene ID:	SGN-U268181
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	268181
mRNA sequence:	Length: 1228 bp

>SGN-U268181 Solanum tuberosum #4 (3 members)
GCAAATCAGAGGTTCCTCAAGTTTCTGTTTTGTTTACATCTAGATGCTTCGCAATTGTTCTAGATCATGTTTTTTCTTTAAAGTATTTGT
TATCAACTTGAAACCTTATTGTGATTTTGTTTAGGAGTAGGTCAAAGACATGGATTCCTTTATGTATTAATGATTTAGCACACCATGGGA
AGCAAACATTCGAAGGGAACAGTTCCTCAGGAAAGTTTTCAACTTCCTTTTGCAGCTTTGCAAGAAGCAACTAACAACTTCGATGACAAG
TTTTTCATTGGAGAGGGTGGATTTGGGAAGGTTTACAGGGGTGTTTTATGTGATGGAACAAAGGTCGCCTTGAAAAGGTATAATTCTCTC
GAACAGTTCCAAACAGAAATTGAAATTCTCTCACAGTTCCACCATCCCAATCTGGTTTCATTGATTGGATACTGTAATGATAACAATGAG
ATGATTCTAATTTTTGAGTATTTAGAGAATGGGAACCTCACTAGACATTTGTATGGGTCAGATCTACCTAGTATGAGCTGGGAGCAGAGG
CTGGAGATATGCATCGGGGCAGCCAGAGGTCTCCACTACCTTCATACTAGCAGAATTATACATCGTGATGTCAGGTCTGCAAACATATTG
CTTGATGAGAATTTTGTGCCGAAAGTTGCTGATTTTGGAATATCCAGGAAAAGGACTGACCTTGATCAAACCAATATTACCACAAGGATA
ATAGGAACAATTGACTACATTGCCCCTGAATATAATCTGTTTGGAGAGCTTACAGAAAAATCTGATGTTTATTCTTTTGGTGTTGTTTTA
TATGAAGTTCTTTGTGCTAGGTCTGCCATATTTCAATCTTTTCCAAGGGACATTGTTAGATTAACTGAATGGGCAGTGGAGTCGCAGAAG
AAGGGACAATTGGAACAAATCGTACATCCCAATCTTGTTGGCAAAATAAGACCAGATTCCCTCAGGAAGTTTGGAGAAACAGCGGTGAAA
TGCTTAGCTGGTTCTGGTGTAGATAGGCCATCTATGAGCGATGTGCTGTGGAATCTGGAGTATGCACTTCATCTCCAAGAGCCTGTCATT
CCAGATGATCCTGAAGAAGACAGTAGCTTCCCTATTCGCGAGCTATCACCGCTAATCAATGATTTCAGTCATGTTGATGCCAGTTCTAAT
GTTGCTCAGATTGGAACATCAAATTTGGATGATATCTCTAGTGATGAGCTTATAAGTC

[Blast] [AA Translation]

Associated Loci (1)

Locus symbol	Locus name	Gene activity
AF288563	tbr5A Pto-like serine/threonine kinase	serine/threonine kinase

Genomic locations (0)

None

Library representation (3)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	STM	mixed tissues	14805	1
Solanum tuberosum	SWST	Stolon	5942	1
Solanum tuberosum	cSTA	Axillary buds of stemp explants; swelling stolons; growing stolons; growing sink-tubers 1 to 3 days (plates 1-20), 4 to 6 days (plates 21-40), 7 to 10 days (plates 41-60)	10537	1

mRNA member sequences (3)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 5 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	1	Prot_kinase	3744
2	21970	Prot_kinase	1313
5	56255	Prot_kinase	690
1.1	101360	Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	4049
2	118407	Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	1853
5	128927	Protein kinase-like Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	615

Preceding Unigenes (1)

Unigene	Build
SGN-U243140	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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