Sol Genomics Network

Unigene SGN-U268326

Unigene Basic Information

Unigene ID:	SGN-U268326
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	268326
mRNA sequence:	Length: 1444 bp

>SGN-U268326 Solanum tuberosum #4 (60 members)
TGTGTAACTCACAAAAACCCTTTTGATTTCGTCTAACCCCAAATCTCCCATTTACTCAAGACTCTCACTTTTTTGGGTTACTTCTCTATC
TCTTTGTAGCCATGTCTGAGGGAGAGAAGGTTTTGCCGACTGCATCCAAAGATGAGAAGTCTGGGGCAGCTGAGAGTAAAAAATCTTCTG
AGTCTTCCACCATGGAAGCACCATTAGGAGAGGGGAGAACAGCCTCTACTGCTGCAGCTGGAGCTGGGGTCCAAAATCCCTTTGATTTCT
CAGCCATGTCTGGACTACTCAATGACCCAAGTATCAAAGAACTAGCAGAGCAGATTGCAAAAGACCCTGCATTTAACCAGATGGCAGAGC
AGCTTCAGAAGACCTTTCAAGGTGCGGCAGTGGAAGAAAGTGTCCCCAACTTTGATAGCCAACAATACTACTCTACAATGCAACAGGTTA
TGCAAAATCCTCAGTTTATGACCATGGCTGAGCGGCTTGGTAATGCATTGATGCAGGATCCATCCATGTCTGGCATGCTTGAGAGTTTGT
CAAACCCTGCTCAGAAGGAGCAACTTGAAGAACGGATGGCGCGCATTAAAGAAGACCCATCACTCAAACCAATCTTGGAAGAGATAGAGA
GCGGAGGACCAGCTGCAATGATGAGGTATTGGAACGATCAAGATGTTCTGAAGAAGATTGGTGAAGCAATGGGTTTTGCTGCTGGAGGAG
AGGGTGGTGCTACCTCTTCTGAAATACCTGGGCCAGATGAAACAGAAGAGGCAAATGAAGATGAATCTGTTGTTCATCAGTGTGCTAGTG
TTGGTGATGCAGAGGGCTTGAAGGCTGCACTAGCTGCTGGTGCTGACAAAGATGAAGAAGACTCGGAAGGAAGGACAGCATTGCATTTTG
CCTGTGGATATGGCGAGGTGAAGTGTGCTCAGCTCCTTGTTGAAGCTGGGGCAAAGGTTGATGCATTGGACAAGAACAAGAATACTGCTC
TTCACTATGCTGCTGGATATGGTAGGAAGGAGTGTGTAGCACTTCTGCTGGAGAACGGAGCTGCTGTAACTCTTCAAAACTTGGACGGAA
AGACGCCAATTGATGTTGCCAAACTCAACAACCAGCAGGATGTCCTAAAGCTGCTTGAGAAGGATGCATTTCTGTGAACTGGCATAGATG
TTTGGTCATGTACAATTGAAACTTTGGATGTCACAGAGTGTGATTCAAGACATCTGTACTTTGAGGATCTTAGGGATCTTATCCATACTT
GATGTGTTATCTTTGCCAGTGTATAATTTTATTGTTTTTCTAAGATTGTGCCTGTTCGAAGAATTTCCTCTGGATGTTTTGTATTTGTAA
ACATCTTTGCTACCATGTTAAATTAACCTTCCAATTTTTTTTCCGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (20)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	ACDA	Tubers	5977	5
Solanum tuberosum	ACDC	Sprouting Tubers	5177	5
Solanum tuberosum	CSCH	Tubers	5038	2
Solanum tuberosum	CSWB	Tubers	6124	1
Solanum tuberosum	IVROOT	Root	5850	6
Solanum tuberosum	MXFL	Floral buds	6603	2
Solanum tuberosum	MXLF	Leaves	6585	2
Solanum tuberosum	PPC	leaf 6 week old	5062	3
Solanum tuberosum	PPI	leaf 6-week old leaf	5434	3
Solanum tuberosum	STM	mixed tissues	14805	3
Solanum tuberosum	STOL	Stolon	6462	7
Solanum tuberosum	SWST	Stolon	5942	3
Solanum tuberosum	TUBS	Tubers	5976	1
Solanum tuberosum	cPRO	roots in vitro grown stem cuttings	10187	2
Solanum tuberosum	cSTA	Axillary buds of stemp explants; swelling stolons; growing stolons; growing sink-tubers 1 to 3 days (plates 1-20), 4 to 6 days (plates 21-40), 7 to 10 days (plates 41-60)	10537	3
Solanum tuberosum	cSTB	leaves and petioles 8 weeks old plants	10327	3
Solanum tuberosum	cSTC	sprouting eyes from tubers 12-14 weeks post harvest	870	1
Solanum tuberosum	cSTD	dormant tuber one month post harvest	5045	5
Solanum tuberosum	cSTE	periderm and subperiderm 24 and 48 hour, and 5 and 7 day	5425	1
Solanum tuberosum	cSTS	sprouting eyes from tubers 12-14 weeks post harvest	9230	2

mRNA member sequences (60)

Alignment image suppressed for unigene with 60 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 0 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	19	ANK	371
2	22435	ANK	29
5	56853	ANK	21
1.1	101379	Ankyrin	460
2	119578	Ankyrin	14
5	130442	Ankyrin	10

Preceding Unigenes (1)

Unigene	Build
SGN-U243741	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
Event Type:
Event Description:
Event Web URL:

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