Sol Genomics Network

Unigene SGN-U268387

Unigene Basic Information

Unigene ID:	SGN-U268387
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	268387
mRNA sequence:	Length: 1583 bp

>SGN-U268387 Solanum tuberosum #4 (133 members)
GTCCTTCTCTTTTTTTCCTCTTCATTTCCCTAACACTGTCAAGAACCTCTCTTCTCCTCTTTTCGCCGCAACTTTCAATCGATCAATTTT
TATTGACGTAGTTGAACCGATCGAAAGATGTTTGGAAGAGCACCGAAGAAGAGTGATAATACAAAGTATTATGAGATCTTAGGAGTTCCT
AAGGCTGCTTCTCAGGAAGATCTCAAAAAGGCTTATCGTAAAGCCGCCATCAAAAATCATCCTGATAAGGGAGGCGATCCTGAAAAGTTT
AAAGAGCTTGCTCAAGCTTATGAGGTCTTGAGTGACCCAGAGAAGCGTGAGATATATGATCAGTATGGAGAGGATGCTCTAAAGGAAGGA
ATGGGTGGTGGAGGTGGTGGACATGACCCATTTGATATATTTCAATCATTCTTTGGTGGTGGTGGAAGCCCCTTTGGTGGTGGTGGAAGC
AGCAGAGCTCGCAGACAAAGAAGAGGAGAGGATGTTATCCACCCTCTCAAGGTTTCTTTGGAGGATCTTTACAATGGGACATCAAAGAAG
CTTTCACTATCTCGCAATGTGTTGTGCTCAAAGTGCAAGGGTAAAGGGTCCAAGTCAGGTGCTTCAATGAAGTGTTCTGGCTGTCAAGGG
TCTGGAATGAAAGTTTCTATCAGACAGCTCGGTCCATCCATGATCCAGCAGATGCAGCACCCTTGCAATGAGTGTAAGGGTACTGGTGAG
ACAATCAGTGACAAAGATAGGTGCCCTCAGTGTAAGGGTGAGAAGGTTGTGCAGGAGAAGAAGGTGTTGGAAGTTCACGTGGAGAAGGGT
ATGCAGAATGGGCAGAAAGTAACATTCCCAGGCGAGGCAGATGAAGCGCCAGAAACCATCACTGGAGACATTGTTTTTGTTTTGCAACAA
AAAGAACATCCTAAGTTCAAGCGAAAGGGAGATGATCTTTTTGTTGAGCACACATTGACCTTGACTGAGGCCCTATGTGGTTTCCAGTTT
GTCTTGACTCACCTAGACAACAGACAGCTGCTCATTAAGTCCCAACCTGGCGAAGTTGTCAAGCCTGATCAGTTTAAGGCTATCAATGAT
GAAGGAATGCCAATGTACCAACGGCCTTTCATGAGAGGTAAAATGTACATTCACTTCACTGTTGATTTCCCCGAGTCATTAACACCAGAG
CAGTGCAAGAACCTTGAGGCTGTGCTGCCTCCAAGACCCAAATTGCAAGTGTCTGATATGGAATTAGACGAGTGCGAGGAGACTACTTTG
CATGATGTGAACATTGAGGACGAGATGCGAAGGAAGCAGCAAGCTGCCCAAGAGGCATACGACGAAGATGATGATATGCCTGGTGGTGCA
CAGAGAGTCCAATGTGCACAGCAGTAATTTGGTATTTGCTATCTTGTGATATTGGGTAGATTACTTACCAGTAAAGGATATGGATATTTT
TTCTTATGCAGACCGACACTAAGTGTGCTTACATGTTTACGCAATTTGTTTTGATTTGTTATCTCATTCAATAATCCTTTTTAATTCCAA
GTCCAATTTGAAACTTCAAAAAAGCTTAATTTGAAAAAAAAAAAAAAAAAACC

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (18)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	ACDA	Tubers	5977	22
Solanum tuberosum	ACDC	Sprouting Tubers	5177	15
Solanum tuberosum	CSCH	Tubers	5038	8
Solanum tuberosum	CSWB	Tubers	6124	1
Solanum tuberosum	IVROOT	Root	5850	17
Solanum tuberosum	MXLF	Leaves	6585	2
Solanum tuberosum	PPC	leaf 6 week old	5062	1
Solanum tuberosum	SLMW	Assorted Stolon/Tuber Developmental Series	1368	4
Solanum tuberosum	STOL	Stolon	6462	17
Solanum tuberosum	SWST	Stolon	5942	3
Solanum tuberosum	TBSK	Tuber Skin	4812	15
Solanum tuberosum	cPRO	roots in vitro grown stem cuttings	10187	3
Solanum tuberosum	cSTA	Axillary buds of stemp explants; swelling stolons; growing stolons; growing sink-tubers 1 to 3 days (plates 1-20), 4 to 6 days (plates 21-40), 7 to 10 days (plates 41-60)	10537	1
Solanum tuberosum	cSTB	leaves and petioles 8 weeks old plants	10327	4
Solanum tuberosum	cSTC	sprouting eyes from tubers 12-14 weeks post harvest	870	1
Solanum tuberosum	cSTD	dormant tuber one month post harvest	5045	5
Solanum tuberosum	cSTE	periderm and subperiderm 24 and 48 hour, and 5 and 7 day	5425	8
Solanum tuberosum	cSTS	sprouting eyes from tubers 12-14 weeks post harvest	9230	6

mRNA member sequences (133)

Alignment image suppressed for unigene with 133 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 3 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	9	DnaJ_N	612
2	21988	DnaJ_N	254
5	56281	DnaJ_N	140
1.1	101369	Heat shock protein DnaJ N-terminal - Molecular Function: heat shock protein binding (GO:0031072)	604
2	118427	Heat shock protein DnaJ N-terminal - Molecular Function: heat shock protein binding (GO:0031072)	212
5	128955	Heat shock protein DnaJ N-terminal - Molecular Function: heat shock protein binding (GO:0031072)	121

Preceding Unigenes (1)

Unigene	Build
SGN-U243190	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
Event Type:
Event Description:
Event Web URL:

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