Sol Genomics Network

Unigene SGN-U268650

Unigene Basic Information

Unigene ID:	SGN-U268650
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	268650
mRNA sequence:	Length: 1840 bp

>SGN-U268650 Solanum tuberosum #4 (22 members)
CTGGATTCACATGGCTGTTTTACTAATGGGTCCTCTTTTTCTCTCTCTCTTCACCTAACCGACAATTATGATCTTTGAATCTTAAACAAA
GAAGAAAAAACTCAAGAAAATAATTCTTCTTCTTCCTCCTTGTAATTTTTCTGTTTTCCCCCTTTTCTCTGTTGATTTTGAGCTGGAGAA
GTTATGGCTGATGATAAGGAGATGTCAGCTCCTGTTATGGATGGGAACGATGCAGTCACTGGTCATATAATTTCCACAACCATTGGGGGC
AAGAATGGCGAGCCAAAGCAGACAGTCAGTTACATGGCTGAACGTGTTGTGGGGACTGGATCCTTTGGAATTGTCTTTCAGGCAAAATGC
CTGGAAAATGGGGAGACTGTGGCAATTAAGAAGGTTCTGCAAGACCGTAGATACAAGAATCGTGAGTTGCAGCTAATGCGCACCATGGAT
CACACAAATGTAGTTTGCCTAAAGCACTGCTTCTATTCAACTACAAGTACAAATGAGCTTTTTCTCAATTTAGTCATGGAATATGTTCCA
GAAACTATGTATAGAGTGCTAAAGCATTATAGCAATATGAACCAGAGAATGCCACTCATCTATGTTAAGCTTTACACCTATCAGGTATTT
AGAGGGCTGGCTTACATGCATACTGTTGCTGGCGTATGCCACAGGGACTTGAAGCCTCAGAATGTTTTGGTAGACCCTCTTACTCACCAA
GTAAAGATTTGTGATTTTGGAAGCGCAAAAGTGCTGGTTAAAGGAGAAGCAAACATCTCATACATCTGCTCGCGGTTTTATCGGGCTCCT
GAACTCATATTTGGTGCAACAGAGTATACTACTTCAATTGACATCTGGTCAGCTGGCTGTGTCCTTGCTGAGCTTCTTCTGGGCCAGCCA
TTGTTCCCAGGGGAAAATGCTGTGGACCAGCTTGTTGAGATAATCAAGGTACTTGGAACACCGACAAGGGAGGAAATTCGCTGTATGAAT
CCAAACTATACTGATTTTAGGTTTCCACAAATCAAAGCACACCCTTGGCATAAGGTTTTCCACAAACGGATGCCTCCTGAAGCAATTGAC
CTTGCTTCTCGGCTACTGCAGTACTCACCAAGTCTACGTTGCACTGCACTTGAAGCATGTGCTCATCCTTTCTTTGATGAACTTCGTGAA
CCAAATGCACGTCTTCCCAATGGTCGCCCATTGCCCCCTCTCTTCAATTTTAAGCAGGAGTTGTCTGGTGCCTCTCCGGACCTGGTAAAC
AGGTTGATACCAGACCATATAAAAAGGCAGATGGGCCTGCATCTTTTTGCATCCCACGGTGACATGACGTGAAGTATATGTTTAGTAAAA
TATACTAGTTTATGATCTATATATGAAGGGATCCAAGTTACACCCCTTCCAGAGCAGAGGAGTCCAGCATGACAAGCGAGACAGTATCTC
CTGGTCGAAAAGGACAATGTAATGGGCTGCAGTGCATTTTAGTTCTGTACTTTGTATTATCTTTTTTGTTCCACTCTTCATAGTCTTCCT
ATCTTAGCAGCCAACTAGTGAAAAGGAAATATGTTTTTGTACATGTTTGTTAGTAGTATATTGACCAGAAAGCTTCCGGGGACACGATTG
AATATGTATGGACAAGTTGCAAGGCTCCAAAAGGATTGCCAGGACTTGAAAGGGCAGTGTCTTTTTTTTCCTTAAGTTGATATGTCACTT
CAGTTTGTATTTAGCAGTCTTGTACTTTGAAAGGAGTTGCAAGCAAATTTGTGTTACAGTTGCTCTATGTGATTATGATTAATCAAACAT
ATCTATTTTGTTGCCTCTTAAAAAAAAAAAAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (11)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	IVROOT	Root	5850	1
Solanum tuberosum	MXFL	Floral buds	6603	2
Solanum tuberosum	PPC	leaf 6 week old	5062	1
Solanum tuberosum	PPI	leaf 6-week old leaf	5434	3
Solanum tuberosum	STM	mixed tissues	14805	4
Solanum tuberosum	STOL	Stolon	6462	3
Solanum tuberosum	SWST	Stolon	5942	2
Solanum tuberosum	TBSK	Tuber Skin	4812	1
Solanum tuberosum	cSTA	Axillary buds of stemp explants; swelling stolons; growing stolons; growing sink-tubers 1 to 3 days (plates 1-20), 4 to 6 days (plates 21-40), 7 to 10 days (plates 41-60)	10537	2
Solanum tuberosum	cSTB	leaves and petioles 8 weeks old plants	10327	2
Solanum tuberosum	cSTE	periderm and subperiderm 24 and 48 hour, and 5 and 7 day	5425	1

mRNA member sequences (22)

Alignment image suppressed for unigene with 22 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 5 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	2	Prot_kinase	1610
2	21980	Prot_kinase	311
5	56349	Prot_kinase Ser_thr_pkin_AS	63
1.1	101361	Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468) Protein kinase-like	1515
2	118420	Protein kinase-like Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	253
5	129072	Protein kinase-like Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468) Serine/threonine protein kinase - Molecular Function: protein serine/threonine kinase activity (GO:0004674) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468) Serine/threonine protein kinase active site - Molecular Function: protein serine/threonine kinase activity (GO:0004674) - Biological Process: protein amino acid phosphorylation (GO:0006468)	47

Preceding Unigenes (1)

Unigene	Build
SGN-U244489	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
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