Sol Genomics Network

Unigene SGN-U268660

Unigene Basic Information

Unigene ID:	SGN-U268660
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	268660
mRNA sequence:	Length: 1452 bp

>SGN-U268660 Solanum tuberosum #4 (84 members)
CCACATTTTTCTTCATCAACACATTACTGTACTGCTGTTGCTGTAATTCTCTAAAAGAACAATGGCTGCTCTCTCAGTAGCCAACACTTC
TCTTAAGGTCAACAACAAAGGATTCTCTGAATTCTCTGGTCTGAGAACCTCATCAGCTGTTCCATTTGGAAGGAAAACAAATGATGATTT
GTTCTCTGTTGCTGGCTTACAGACCTCTGCTATTGGAGGAAGGAAGAACAAGAGGATAGTAACTGAGGCAAAGTTGAAAGTGGCTATCAA
TGGATTTGGAAGAATTGGAAGGAACTTCTTGAGGTGTTGGCATGGTAGAAAAGACTCACCTCTTGATGTCATTGCCATCAATGACACTGG
TGGTGTCAAGCAAGCTTCTCACCTTCTCAAATATGACTCCACCCTTGGCATCTTTGATGCTGACGTCAAGCCGGTTGGCACTGATGGAAT
CTCTGTCGATGGAAAAATCATCCAAGTCGTCTCCAACCGTGACCCTGTGAACCTCCCATGGGGAGAACTTGGAATTGATTTGGTCATAGA
AGGTACCGGAGTGTTTGTAGACAGAGAAGGTGCCGGTAAACACATCCAGGCCGGAGCCAAGAAGGTGCTCATCACCGCCCCCGGAAAAGG
TGATATCCCTACTTATGTTGTTGGTGTCAATGCTGAACTTTACAACCATGATGAACCTATCATCAGCAATGCCTCTTGCACCACCAACTG
CCTTGCTCCTTTCGTCAAGGTTCTTGACCAGAAATTTGGAATTATCAAGGGAACAATGACAACTACTCACTCTTACACCGGTGACCAAAG
GCTTCTTGATGCAAGCCACAGGGATCTTAGACGTGCACGAGCTGCAGCACTCAACATAGTTCCAACCTCAACTGGTGCTGCTAAGGCTGT
GGCTCTTGTTCTCCCAAGCCTCAAGGGGAAACTCAACGGCATTGCCCTCCGTGTTCCCACCCCTAACGTCTCAGTTGTGGACCTTGTCGT
TCAAGTCACCAAGAAGACATTTGCTGAGGAAGTGAATGCTGCATTCAGAGAAGCTGCTGATAAGGAACTCAATGGCATTCTATCTGTCTG
TGATGAACCACTCGTGTCAGTTGACTTCCGGTGCAGTGATGTGTCATCAACCATTGATTCTTCACTCACCATGGTCATGGGAGATGACAT
GGTTAAGGTTATTGCTTGGTATGACAATGAATGGGGTTACTCACAGAGGGTTGTTGATCTTGCTGACATTGTTGCAAACCAGTGGAAATG
AAACATGAAAATAAAATAAAGCAGTACTACTAAATAGTGGCTTAATTTATATATTTTTAATCTTGTTTGTAGATTCTTATTCCTTTTTGA
AAATTGTAATGAGAACTATAACAATTTTCCACCTTGTGAAATCTCAATTCAATAAAAGTTCCATTTCTTATCTTTAAAAAAAAAAAAAAA
AAAAACCGAGAC

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (8)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	IVROOT	Root	5850	1
Solanum tuberosum	MXFL	Floral buds	6603	1
Solanum tuberosum	MXLF	Leaves	6585	6
Solanum tuberosum	PPC	leaf 6 week old	5062	7
Solanum tuberosum	PPI	leaf 6-week old leaf	5434	21
Solanum tuberosum	STM	mixed tissues	14805	8
Solanum tuberosum	cPRO	roots in vitro grown stem cuttings	10187	10
Solanum tuberosum	cSTB	leaves and petioles 8 weeks old plants	10327	30

mRNA member sequences (84)

Alignment image suppressed for unigene with 84 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 5 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	193	GAP_dhdrogenase GAPDH-I E4PD_g-proteo	76
2	22084	GAP_dhdrogenase GAPDH-I E4PD_g-proteo	74
5	56507	GAP_dhdrogenase GAPDH-I E4PD_g-proteo	35
1.1	101545	Glyceraldehyde 3-phosphate dehydrogenase - Molecular Function: glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity (GO:0004365) - Biological Process: glycolysis (GO:0006096) - Molecular Function: NAD binding (GO:0051287) Glyceraldehyde-3-phosphate dehydrogenase type I - Biological Process: glucose metabolism (GO:0006006) - Molecular Function: glyceraldehyde-3-phosphate dehydrogenase activity (GO:0008943) - Molecular Function: NAD binding (GO:0051287)	78
2	118512	Glyceraldehyde 3-phosphate dehydrogenase - Molecular Function: glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity (GO:0004365) - Biological Process: glycolysis (GO:0006096) - Molecular Function: NAD binding (GO:0051287) Glyceraldehyde-3-phosphate dehydrogenase type I - Biological Process: glucose metabolism (GO:0006006) - Molecular Function: glyceraldehyde-3-phosphate dehydrogenase activity (GO:0008943) - Molecular Function: NAD binding (GO:0051287)	71
5	129168	Glyceraldehyde 3-phosphate dehydrogenase - Molecular Function: glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity (GO:0004365) - Biological Process: glycolysis (GO:0006096) - Molecular Function: NAD binding (GO:0051287) Glyceraldehyde-3-phosphate dehydrogenase type I - Biological Process: glucose metabolism (GO:0006006) - Molecular Function: glyceraldehyde-3-phosphate dehydrogenase activity (GO:0008943) - Molecular Function: NAD binding (GO:0051287)	34

Preceding Unigenes (1)

Unigene	Build
SGN-U243503	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
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Event Web URL:

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