Sol Genomics Network

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Unigene SGN-U268872

Unigene Basic Information

Unigene ID:	SGN-U268872
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	268872
mRNA sequence:	Length: 1899 bp

>SGN-U268872 Solanum tuberosum #4 (60 members)
AATTTTCAAGTGGAGTATTGAGATTCTTTAGAGATATCCTACCCACCCCTTTATAAATAAACACAATACCCCAAGGGACAAAAGAGGCAG
CAAGCAAACATGGGTATTGCAGTTTTCATTGCTTTGGCCGTATGTTTGCCTTTCAGTTTTTGGTGCCTAAAATTGCTCTACTTTGTATGG
TGGCGTCCCAAAACAGTAGAAAATGAACTGCGGCAGCAAGGAATATATGGGCGTCCCTATAGATTTCTATTTGGAAATCTAAAGGAGATG
ATAGAGATGAATAAAATAGCCAAGTCTAAACCCATGCCATTGCACCACGATTTCACACCTCGACTTAATCCATTGTTCTATGAACTGGCC
ACCACTTACAAGAAACTTTACTTGTTTTGGCTAGGACCGATACCTCGATTAACCATTTTGGATCCCAAGTTAATTAAGGAAGTACTGTCA
AACAAATCGGGTGAGTTCAGAAAACCAAACATCAGCGCTTTCCTGAAGCTATTTGTAACGGGGCTGGGGACTTACGATGGTGAAAAATGG
GCGAAACACAGAAAAATTCTTAATCCGGCTTTCCACATGGAAAAATTGAAGGTGATGTTGGGATTATTTGTTAACTGTACCGATGACATG
ATAAGCAGATGGGACAAGCTAACTGGTTCAACGGGTGGTTCTTGTGAAGTAGATATTTCTCAAGAATTTCATAATTTAACTGGAGATATG
CTATCGAAAGCAGCCTTCGGTAGCAATTTTGAAGAAGGGAAGTTGGTATTTTCACTTCTGAGAGAGCAATGTGAACTAATTTTCACTGCA
AAGCTTGCTATTAATGTCTTCCCATGGTTAAGGTTTGTGCCAACGAAAACTAATAGGAGAAGATTGTACATCTATAACACAGTTCGTAGT
TCGCTAAAAGCAATAATTGAGAAACGAGAGAAAGAGGTACAATCTGGAAAATCACACAATGAAGATCTGTTGGGTTTGCTAATGAAATCT
AATCAGGAAGAACAGCAAGGGAATAAGAACTCGAACAAAGGAATGAGTACAGAGGATATGATAGAAGAGTGCAACTCTTTCTATTTTGCT
GGTCAAGAGACTACTGCAACTTTGTTAACATGGACTGCAATTGTCTTGACTATGCATCCAGATTGGCAAGAGAAAGCCAGGAAAGAAGTT
CTTGAAGTCATTGGAAAAGATGAGCCTAAGTTTGATCAACTCAACCATCTAAAGATTGTAACTATGATCTTGCACGAGGTTCTGAGGTTA
TATCCATCAGGTTCTCTTGTTAGAGAAACAAACAAAAAGACAAAGCTTGGAGAGTATACAATCCCAGCAGGTGCGCAACTTTTAGTGCCT
CTACAAACAATCCATCGCGATACAGAGGCATGGGGAGAAGATGCTCTAATTTTCAATCCAGAAAGGTTTTCAGAAGGGGTATCAAAAGCA
TCAAAGGACCTGATGTACTTTCCGTTTGGTTGGGGTTCTCGGATATGCCTTGGAATGAATGTTTCCATGATTCAAGGGAAGCTTGTTTTG
GCTAAAATCTTACAGAACTACTCCTTTGAGCTTTCCCCCTCCTATGCTCATGGTCCAACCATGCCAGCTCTTGTTCTACAACCACAATAT
GGTGCTCCTATGATCCTTCGAAAGCTATCATGATATTGGTCACCCTAACATGAATCAATAAATCACTTCTCTGTTTCCTATTGTTGTGAA
CTTTTCTTCATTCTATCCACAAACAGTAATATAAGGATTTGCTGTTTTTACAGCAATCTCAAGTTCACATCATTACATGATGCTTAAATT
AAATGTTTGTTTTCAGAATCTGTGTTGAATCTTATTAGCTAAATCTGAGGCAAAATGGGTTAATGAAGTGACTAATTTAGTTTTTTCAAA
AAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (10)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	MXFL	Floral buds	6603	1
Solanum tuberosum	MXLF	Leaves	6585	1
Solanum tuberosum	STM	mixed tissues	14805	6
Solanum tuberosum	STOL	Stolon	6462	6
Solanum tuberosum	cPRO	roots in vitro grown stem cuttings	10187	1
Solanum tuberosum	cSTA	Axillary buds of stemp explants; swelling stolons; growing stolons; growing sink-tubers 1 to 3 days (plates 1-20), 4 to 6 days (plates 21-40), 7 to 10 days (plates 41-60)	10537	14
Solanum tuberosum	cSTB	leaves and petioles 8 weeks old plants	10327	18
Solanum tuberosum	cSTC	sprouting eyes from tubers 12-14 weeks post harvest	870	1
Solanum tuberosum	cSTE	periderm and subperiderm 24 and 48 hour, and 5 and 7 day	5425	2
Solanum tuberosum	cSTS	sprouting eyes from tubers 12-14 weeks post harvest	9230	10

mRNA member sequences (60)

Alignment image suppressed for unigene with 60 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 4 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	4	Cytochrome_P450	973
2	22019	Cytochrome_P450	140
5	56286	Cytochrome_P450	129
1.1	101365	Cytochrome P450 - Molecular Function: monooxygenase activity (GO:0004497) - Molecular Function: iron ion binding (GO:0005506) - Biological Process: electron transport (GO:0006118) - Molecular Function: heme binding (GO:0020037)	908
2	118455	Cytochrome P450 - Molecular Function: monooxygenase activity (GO:0004497) - Molecular Function: iron ion binding (GO:0005506) - Biological Process: electron transport (GO:0006118) - Molecular Function: heme binding (GO:0020037)	121
5	128959	Cytochrome P450 - Molecular Function: monooxygenase activity (GO:0004497) - Molecular Function: iron ion binding (GO:0005506) - Biological Process: electron transport (GO:0006118) - Molecular Function: heme binding (GO:0020037)	116

Preceding Unigenes (1)

Unigene	Build
SGN-U243603	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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