Sol Genomics Network

Unigene SGN-U269030

Unigene Basic Information

Unigene ID:	SGN-U269030
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	269030
mRNA sequence:	Length: 1612 bp

>SGN-U269030 Solanum tuberosum #4 (16 members)
GATTCACTTCAATATAGAGAGAGAAATTGAAAAAATATCTTTAAAAAATTGTAGTGAGAGAGGATTAGCAGTAATCGGAAATGGCAGGAA
GAGTAGATCTGGACGGTAATCCCATAAAACAGATTACGATATGCATGATTGGTGCCGGTGGATTCATTGGTTCTCATTTATGTGAGAAGC
TTTTGTCGGAGACTCCTCATAAGGTGCTAGCCGTCGATGTTTACAGTGATAAGATTAAGCATTTGCTTGAACCGGCGACGGTTACTTGGG
CTGATCGAATTCAGTTTCATAGAATCAATATTAAGAATGATTCTCGCCTTGAAGGTCTCATCAAAATGGCAGATCTGACCATAAATCTTG
CTGCGATCTGTACTCCAGCAGATTATAACACTCGTCCACTTGATACAATTTACAGCAATTTCGTTGATGCTCTACCAGTGGTCAAGTACT
GCTCAGAAAATGGAAAGCGTCTCATTCACTTCTCAACTTGTGAAGTTTACGGGAAAACCATAGGTGCCTTTTTACCCAAAGACAGCCCAC
TGCGGCAGGATCCTGCTTATTATGTGCTTAAGGAAGACACCTCCCCTTGCATCTTTGGACCAATTGAGAAGCAGCGGTGGTCCTATGCGT
GTGCAAAACAATTGATTGAGAGGCTGGTCTATGCTGAGGGTGCGGAGAATGGCTTAGAGTTCACTATTGTAAGGCCATTTAACTGGATTG
GTCCTAGGATGGATTTCATTCCTGGCATCGATGGTCCTAGTGAAGGTGTTCCAAGAGTATTAGCTTGCTTTAGTAATAACCTTTTAAGAC
GTGAACCTTTGAAACTTGTGGATGGGGGAGAATCACAAAGGACGTTCATATACATCAAAGATGCTATTGAAGCTGTTCTTCTAATGATCG
AAAATCCTGCCAGAGCCAATGGCCATATCTTTAATGTTGGTAACCCTAACAATGAAGTTACTGTCAGGCAGCTGGCTGAAATGATGACTA
AGGTGTACTCAAAGGTGAGTGGAGAGTCTTCTATTGAAACACCCACCATTGATGTAAGTTCTAAAGAATTTTATGGTGAGGGGTATGATG
ACAGTGACAAGAGGATTCCGGACATGACCATAATCAACAGGCAGCTTGGTTGGAACCCAAAGACTTCCCTATGGGACTTGCTAGAATCCA
CACTCACATACCAACACAGGACCTATGCCGAGGCTGTCAAGCAGGCCATGTCTAAAACAACAGCAAATTGATTGTTCGCTGCTTGTTGGC
AGGTCTTTCAATATCTTGTTACGATTCTCCCGAGTAAAAATCTACAGTCCATCACTCATACACGTAATTTTACGTCCCTTCTGTAATCAA
TCATGTATTCTATTTTGTGACAGCATATTTATTAAGAAATTTGTGTCATAGGCTGGGTGTATTATGTCACTAGAGCTTCAAATAGTTATT
GGGGTATTAGATAAAGGAAAAGCTGTCCTGTTCTTGTAAGATTTGTTGTCATTCATCTATTCATTCCTGTGTATGGAAACATCTTGTATC
ATTTTGATCGACCTATTGATGGAGCTATAAATTTTTCCTATTTATTCAAAAAAAAAAAAAAAAAACTGAACTAGTCTCTCTC

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (7)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	MXLF	Leaves	6585	1
Solanum tuberosum	PPI	leaf 6-week old leaf	5434	2
Solanum tuberosum	STM	mixed tissues	14805	2
Solanum tuberosum	SWST	Stolon	5942	3
Solanum tuberosum	TUBS	Tubers	5976	1
Solanum tuberosum	cPRO	roots in vitro grown stem cuttings	10187	5
Solanum tuberosum	cSTA	Axillary buds of stemp explants; swelling stolons; growing stolons; growing sink-tubers 1 to 3 days (plates 1-20), 4 to 6 days (plates 21-40), 7 to 10 days (plates 41-60)	10537	2

mRNA member sequences (16)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 0 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	9	DnaJ_N	612
2	22865	dTDP_gluc_dehyt GalE Epimerase_Dh 3Beta_HSD	18
5	57006	dTDP_gluc_dehyt GalE Epimerase_Dh 3Beta_HSD	18
1.1	101369	Heat shock protein DnaJ N-terminal - Molecular Function: heat shock protein binding (GO:0031072)	604
2	119284	NAD-dependent epimerase/dehydratase - Molecular Function: catalytic activity (GO:0003824) - Biological Process: nucleotide-sugar metabolism (GO:0009225) - Molecular Function: NAD binding (GO:0051287)	17
5	129634	NAD-dependent epimerase/dehydratase - Molecular Function: catalytic activity (GO:0003824) - Biological Process: nucleotide-sugar metabolism (GO:0009225) - Molecular Function: NAD binding (GO:0051287)	17

Preceding Unigenes (1)

Unigene	Build
SGN-U243808	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
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