Sol Genomics Network

Unigene SGN-U269063

Unigene Basic Information

Unigene ID:	SGN-U269063
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	269063
mRNA sequence:	Length: 1408 bp

>SGN-U269063 Solanum tuberosum #4 (4 members)
CAGATGGCCTGGTATGGGTGAACCAGTGGAATCCATTCCAGTATTCTGTGGCCTCTTCATTTCTGGCAGTGGTTTACAGTGATTACATGC
TTAGCTCCCAAACGTCAAATTTATATTGCAGTGGGAAGTTATATGAACCAACAGAATTGCGCAACTTTGCAGTTTCACAGTTGGATTATA
TCTTGGGAAACAATCCAATGGAAATGAGCTACCTTGTTGGTTATGGAAGTAGATATCCTCAGCAAGTTCACCATAGAGGTGCTTCAATTC
CAGTAAATGCTAATTCTAATTGCAGTGATGGCTTCAAATGGCTTCACACAAGACACCCTAATCCAAATGTTGCAGTTGGAGCTCTTGTTG
GGGGACCATCCCTTAGTGATACATACATGGACTCTCGTAACAACATTTCGCAAAGTGAACCAACTACCTACAACAGTGCCCTCATTGTAG
GACTCATCTCAGGCCTTATCACCTCTTCTTCACAAGTAGAGTCATTTGTGAAAAACTGAAAACTCAACTCCATCACTGTTTTCTCCCTGT
TAACTAAGCAGGCCTTGCTTACCCTTCGGGGTGGCCCAGTGGTTTGGGCTTGGGACTTCCATGTTGGAGGTCTCAAGTTCGAAACCCCTT
GCCAGCGAAAGCAAGGGGTTTGCCTTCTGGGTCGAGCTTGTCGCACCAGGCTTGCCTAGTGCGGGTTACCTCTCCTATGTGGTCTGCGAG
CTATTGCATAGGAGCGGGGGTTTTCCCCTGTGCGCACCCAAAGGGTAGCGGCAACGGGTTTCCCTTGTCATAAAAAAAAAAAATACTCTT
TAGTTGGCACTGTCATCTTTTTGAAGTTGAACAGCTCGTTATCCCAATGTGTTGGTCTTGTGTTTTTTATGATGTGCTGGACTTTTAAAG
TGCATCGGTTATTTAGAAATCTTATTCTGAATTTGTTGCTTTTTTGGCAGAGATGTGAAGTTTGAAGACTTCCTTTGGGCAAACTCCATA
TTTTGGAGTCGAGCACTAAATATCCCTTTTCCGCGCTGCTATATATTTCCTATGGATTCAGAAGGACAAGATAGTGACATTTCTAGCAAA
ATCGTCAATTCTGCAACACAAACTAATGGCTGTGGCAGTTTATCTGATGGAGAGTCTGCAAAAGTACCCGAATATGATGCACTCCAAGAT
AAAGTTGCTTCTGCTGCTTCCGTTTCACAAGGAGAGATAGTTTGGGTGGAAGGTCTGGTCCCAGGCATTGATTTTTGCAACCATGATTTC
AAAGCTGCAGCAACATGGGAAGTTGATGGAACAGGAGCAACAACTGGAGTTCCTTTCTCCATGTACCTTCTTTCTGCTGGAGAAAATCTT
CCCTGGTCGAGAAAGGATATCAATTAGCTATGGGAACAAGGGAAATGAGGAACTGCTG

[Blast] [AA Translation]

Associated Loci (1)

Locus symbol	Locus name	Gene activity
AY753547	phytoalexin-deficient 4-2

Genomic locations (0)

None

Library representation (2)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	STM	mixed tissues	14805	3
Solanum tuberosum	cPRO	roots in vitro grown stem cuttings	10187	1

mRNA member sequences (4)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 2 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	141	Glyco_hydro_9	94
2	22055	Glyco_hydro_9	92
5	56688	Glyco_hydro_9	26
1.1	101447	Six-hairpin glycosidase Glycoside hydrolase family 9 - Molecular Function: hydrolase activity hydrolyzing O-glycosyl compounds (GO:0004553) - Biological Process: carbohydrate metabolism (GO:0005975)	149
2	118491	Six-hairpin glycosidase Glycoside hydrolase family 9 - Molecular Function: hydrolase activity hydrolyzing O-glycosyl compounds (GO:0004553) - Biological Process: carbohydrate metabolism (GO:0005975)	84
5	129323	Glycoside transferase six-hairpin subgroup Six-hairpin glycosidase Glycoside hydrolase family 9 - Molecular Function: hydrolase activity hydrolyzing O-glycosyl compounds (GO:0004553) - Biological Process: carbohydrate metabolism (GO:0005975)	25

Preceding Unigenes (1)

Unigene	Build
SGN-U244538	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
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