Sol Genomics Network

Unigene SGN-U269476

Unigene Basic Information

Unigene ID:	SGN-U269476
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	269476
mRNA sequence:	Length: 1912 bp

>SGN-U269476 Solanum tuberosum #4 (34 members)
ATAGTTTCAGTATATTTTTATTTTTTCTTTTTCTGTGGTTTTTGTATTTGTTTTTTTCTATATATTTTGTTTCTTAATTTGGTAATAATT
CGGAGTTGTGATCTATCCTTAGGGCTTCTTATATGAGTTGATAGGGTTAGAAAGGTGTGGATCCATCAAAGAAACATCAAATCTCAAAAT
TAGGGTTTCCCACCTTTTACAGTCGCGCCAGTTCCCCATCTATCTATACATACATATATATCTGATTGTGATTTTGTAGATCTTTTCAAA
TTTATGTTTTAATTCTATTTTTCTTTGATCTCACAACTCGGGAAAAGCAATTGTGCTTCAATTTTTTGTTCATCGGTCAATTGTCACTTT
CTTTCATTTGGGGACTTTTTTTTTTTTTGATCAATTTCGATTCTATCATATCGGCGCTGGGTTGGGTTTCTCGTAGAAATCATAATCTTT
GTGATTTGATTTAATTAGAATTGGCAGTAATGGATAAGAAGAAAGTTGTGGCACCGCTTGTTTGCCATGGGCATTCTCGTCCTGTTGTTG
ATCTGTCCTACAGTCCAATCACTCCTGATGGATTCTTCCTCATCAGTGCCAGCAAGGATTCTACGCCAATGCTGAGAAATGGAGAGACTG
GAGATTGGATTGGAACATTTGAAGGGCATAAAGGAGCCGTGTGGAGTTGTTGTCTGGATAAACATGCTCTTCGTGCTGCATCTGCATCTG
CCGATTTCAGCGCGAAATTATGGGATGCATTGACTGGGGATGTATTACACTCATTTGACCACAAGCACATAGTTCGAGCATGTGCCTTTT
CAGAGGATACAAATCTGCTACTCACCGGTGGTTTTGAAAAAATTCTTCGGATATTTGATTTAAACCGACCTGATGCACCTCCAAGGGAAA
TTGACAGCTCTCCTGGTTCAGTAAGGACAGTTGCTTGGCTGCACAGTGATCAAACCATTTTGAGTTCCTCTGGAGATGCTGGTGGATTGA
GGTTATGGGACGTGAGGAGCGGTAAAGTTGTTCAAATCCTTGAAACTAAGTTTCCTGTAACCAGTGCTGAAGTAAGTCAGGATGGTCGTT
ACATAACAACTGCTGATGGTTCCTCTGTCAAGTTTTGGGATGCTAACCACTTTGGATTGGTGAAGAGTCACGACTTGCCTTGCAAAGTTG
AATCTGCTTCCCTGGAACCAAAGTTCGGTAATAGGTTCATTGCCGGAGGAGAAGATATGTGGGTTCATGTCTTTGATTTTCACACTGGAG
AGGAAATTGGATGCAACAAGGGACACCACGGTCCTGTGCACTGTTTGCGGTTCTCTCCAGGAGGTGAATCCTATGCCTCAGGATCTGAAG
ATGGGACTATTAGAATATGGCAGCTGGGCCCTCTTGGTCAGATTGAGGACAACTCCACAGCAAACGGGTCTACTACTGCAAATGCCAATG
ATGGTATGAGCGAGGTGACCCAAAAGATTGACGAGTTGGCTGTTTCAGAAACAAAGAAGATGGAAGAGACACAGGTCGATGGTGTGGAGC
AGAAGGTAGTTGATGCCTGATTAGGAATTTAAGGGTTTTGTATGGTTTCTCCTTTTGGAAAGCTGTAACTGGCTTGACTTCGGAGGTTTT
TGCTTATGAAATAAGACTTAAGCTTTTGATAGTGCTGGGTATTCTTTGCTTGCCCGAGATCGTAATCATCAGTTATATAGTCTTTGGAGT
AGTTTTCTCTGTAGAACTGAGAGAAGTACCTAGCTCTCTTCTCAGGTTCATGTTGTCCTTGGATTTGCAATTGCTTTTACAAACCAGTCA
GGATGTCCAAACCAGAATAGTCGCAAACCTAGTGCCTTAATAGTATGAAAAAGTAAACTCTGTAACAAGGCTTAAATTCAATGAAATAGT
ACTGAGTTTTGACAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (14)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	ACDA	Tubers	5977	5
Solanum tuberosum	CSCH	Tubers	5038	2
Solanum tuberosum	CSWB	Tubers	6124	2
Solanum tuberosum	IVROOT	Root	5850	1
Solanum tuberosum	MXLF	Leaves	6585	1
Solanum tuberosum	PPI	leaf 6-week old leaf	5434	1
Solanum tuberosum	STM	mixed tissues	14805	1
Solanum tuberosum	STOL	Stolon	6462	2
Solanum tuberosum	SWST	Stolon	5942	5
Solanum tuberosum	cPRO	roots in vitro grown stem cuttings	10187	2
Solanum tuberosum	cSTA	Axillary buds of stemp explants; swelling stolons; growing stolons; growing sink-tubers 1 to 3 days (plates 1-20), 4 to 6 days (plates 21-40), 7 to 10 days (plates 41-60)	10537	1
Solanum tuberosum	cSTD	dormant tuber one month post harvest	5045	8
Solanum tuberosum	cSTE	periderm and subperiderm 24 and 48 hour, and 5 and 7 day	5425	1
Solanum tuberosum	cSTS	sprouting eyes from tubers 12-14 weeks post harvest	9230	2

mRNA member sequences (34)

Alignment image suppressed for unigene with 34 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 0 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	6	WD40	833
2	23544	WD40	12
5	57786	WD40	11
1.1	101368	WD-40 repeat	806
2	120916	WD-40 repeat WD40-like	7
5	131640	WD-40 repeat WD40-like	6

Preceding Unigenes (1)

Unigene	Build
SGN-U244514	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
Event Type:
Event Description:
Event Web URL:

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