Sol Genomics Network

Unigene SGN-U269914

Unigene Basic Information

Unigene ID:	SGN-U269914
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	269914
mRNA sequence:	Length: 1514 bp

>SGN-U269914 Solanum tuberosum #4 (12 members)
CAATTATTACAGCAACATTAGAATTTCAAGATTTGGATGTTGCCTTCTTTTCCACTTACCATATTTTTGTCCAAATTTTTGAGGATTTAT
AAGCTGCTGTAATCAATCTTTTTTGACCCCCAAACAACAAAGGCTGCAACTTTCATACTTTCTTCATCTTTATCTTTATCTTGGCCAACA
TCCCATTTCAAAATTTCAGCTCAAATAAAAGTTCTTTAAGAAGGATTACGCCTGCACTTTTTAAAGGACTGTGCAAGTATCTCAGTAATG
AATCAGGCAAAAATCAAGCGCAGAGTTGGTAAATATGAAATGGGAAGGACAATTGGTGAGGGAACATTTGCTAAAGTTAAATTTGCGAGG
AATTCGGAGACAGGAGAACCTGTAGCAATCAAAATTCTTGATAAGGATAAGGTCCTTAAGCACAAAATGGCTGAGCAGATAAAGCGGGAG
ATAGCTACAATGAAGTTAATCAGGCATCCACATGTCGTTCAGTTATACGAGGTGTTGGCTAGCAAGACAAAGATATTCATTGTTCTGGAG
TTCGTTACAGGTGGAGAGCTCTTTGACAAAATTGTAAATCATGGACGGATGCATGAAAAAGAAGCAAGGAAATATTTTCAGCAGCTTATT
AATGCTGTTGATTACTGTCATAGCAGGGGAGTCTACCATAGAGATTTAAAGCCTGAGAATTTACTGTTGGATGCCTCAGGAAACCTCAAG
GTTTCTGATTTTGGATTGAGTGCTCTGTCCCAGCAAGTCAGGGATGATGGCTTACTCCACACCACATGTGGAACTCCCAACTATGTTGCT
CCTGAGGTACTCAATGATCATGGATATGATGGTACAACCGCGGATCTGTGGTCGTGCGGAGTCATACTCTTTGTATTGCTTGCAGGTTAC
TTGCCTTTTGATGACTCCAATCTTATGAACCTGTATAAAAAAATCTCTGCTGCTGAATTTACATGTCCTCCTTGGATGTCTTTTGGTGCT
ATGAAGTTAATTACTCGCATCTTGGATCCGAACCCTATGACACGTATCACCATCCCAGAAATTCTGGAGGACGAGTGGTTCAAGAAAGAT
TATAAATCTCCCATTTTTAATGAGAAAGGAGATGCCAACCTGGATGATGTTGAAGCTGTCTTCAAGGATTCTGAAGAACATCATGTAACA
GAGAAAAAGGAAGAGCAGCAACTCCCATGAATGCATTCGAGTTGATTTCAATGTCCAAAGGACTCAACCTTGGGAATCTCTTCGATGAAC
AGGGGATTTAAGAGAGAAACAAGGTTCACATCTAAATGCTCCGCAATGAAATTATCAGTAAGATTGAAGAAGCTGCAAAGCCCCTCGGTT
TTTGATGTTCACAAAAAGAAACTACCAATGAGACTTCGCCATGTTAAAGCTGGGAAGAAAAGGGAAGCTTAATGTTGCACTGAGGTATTT
CAAGTTNGCCTTCTCTTCATATGGGTTTGAAGTGCGGAAGGCAAAAGGAGATACCTTTGGGAATTCCACAAGTT

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (8)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	ACDC	Sprouting Tubers	5177	1
Solanum tuberosum	IVROOT	Root	5850	2
Solanum tuberosum	MXFL	Floral buds	6603	2
Solanum tuberosum	STOL	Stolon	6462	2
Solanum tuberosum	cSTA	Axillary buds of stemp explants; swelling stolons; growing stolons; growing sink-tubers 1 to 3 days (plates 1-20), 4 to 6 days (plates 21-40), 7 to 10 days (plates 41-60)	10537	1
Solanum tuberosum	cSTB	leaves and petioles 8 weeks old plants	10327	2
Solanum tuberosum	cSTD	dormant tuber one month post harvest	5045	1
Solanum tuberosum	cSTE	periderm and subperiderm 24 and 48 hour, and 5 and 7 day	5425	1

mRNA member sequences (12)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 6 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	2	Prot_kinase	1610
2	21972	Prot_kinase	672
5	56271	Prot_kinase Ser_thr_pkin_AS	192
1.1	101361	Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468) Protein kinase-like	1515
2	118408	Protein kinase-like Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	587
5	128941	Protein kinase-like Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	167

Preceding Unigenes (1)

Unigene	Build
SGN-U245865	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
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