Sol Genomics Network

Unigene SGN-U269971

Unigene Basic Information

Unigene ID:	SGN-U269971
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	269971
mRNA sequence:	Length: 1650 bp

>SGN-U269971 Solanum tuberosum #4 (22 members)
CAAAGTCATCCAAATTATTCTAAGAAAAAAAAAGAGAGAGGGAGAGAGAGAGAACAATGGATTTCTACAATTTAGCCTTGTTCTTCATAG
CTTTAGTAATTGGGATTTTCACATTTTATGCTATATTAATGAGAATTAATGGTTGGTATTATGCAATCAAATTTTGTTCAAAGAAATATA
ACATCCCTCTTGGTTATATGGGTTTGCCATATTTTGGCAACACACTTTCTTACTTCAAATCTACCATTTGTGGTGATCCAAATTCATTCC
TTGATTTCTTTGCTACTAGGTTTGGGACAGGAGGAATGTATAGAGCATACATATTTGGGAAGCCAACAATTATGGTGACAAAGCCAGAAA
TAATTAGAAAAGTTTTGATGGATGAAGAATATCTTGAAAGAGGTTTGCCTAATTATATGAAAAAATTAATTGGATTAACAACTTCGATTG
AAGAAGATAAGTATTTTCGTCGAGTAACAGCTCCAGTAAAAAGTCATGGATTATTATCCGATTATTTTGATTATATCGATAAAACTGTGA
GAACTACATTAGAGAAATACGCTACTACAGAAGAACCTATTGAGTTTCTCCATAAGATGCACAGGCTTGCATTTGAGGTGTTTATGAGAC
TTCTTATTGGTGATGAGGTTAATCAAGAATTTTTTGATCAAATGTTTGAGGAGATTACTGCTGTAATTAGTGGTGTTCACAACTTGCCTA
TTAATCTCCCAGGATTTCCTTATCATAAGGGACTCAAGGCTCGAAAAGTACTAGGAGGGATATTTCAAAAACTAATAGATGAAAGAAGAG
AAGCCATGAAGGATGGAAAATCAATGCCAAGGGCAAACATAATTGATATGTTGTTATCAAACACTAATCAAGATTATGAAGCCAATATAT
TGAGTGACAAGAAGATCATTGAAATCCTAGTTTTGTTTTCATTTGCTGGTTTTGAACCTGTTGCTCTTATGTCTGTCAAGGCAATTTTTC
ACTTGCAAAAGCATCCCCATTTCTTGGAGAAAGCCAAAGAGGAACAAGAGGAAATAGTAAAGAGAAGAGCATCTTCAAATGTTGGACTTA
GTTTTGATGAGATTAGACAAATGACTTTTGTTAGTAAGGTAATTAATGAAACGTTACGTATTGCTACTGATCAAACGGTATTCCTTAGAG
ACACAAGTACTACTTTTAACATAAATGGGTACACCATACCCAAAGGATGGAAGTTTTTTGCAGTTGTATGGAATATTCATATGAATCCTG
ATGTTTATGTTCAGCCTAAGGAATTTAATCCTTCAAGATGGGATGATATTGAAACTAAGCCAGGCATTTTTCTTCCATTTTCAATGGGCC
CCAAATCATGCCCAGGATCCAATCTGGCCAAGCTTCAAATTTCAGTAATTCTTCATTATTATCTTCTTCACTACAGGGTTGAGCAAATTA
ATCCAGAGGCTAGATGTTATCCTCCTGAAAATTGTCTTGTGAAATTCAAGAAGCTCTCAATCTCTAGTGATGGTAACTAATTTTAATCAT
TGTGTTACAAATAAATAATTCATGTTGTAATCTTGAAAACAATAAGTGTATTGAATAATTATTAAATTGGATGTTTTTGTAGAACGTTTA
ATCCAGTTTCAAATCTAGTTGGATACAGAG

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (7)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	MXFL	Floral buds	6603	1
Solanum tuberosum	PPC	leaf 6 week old	5062	2
Solanum tuberosum	STM	mixed tissues	14805	2
Solanum tuberosum	cSTA	Axillary buds of stemp explants; swelling stolons; growing stolons; growing sink-tubers 1 to 3 days (plates 1-20), 4 to 6 days (plates 21-40), 7 to 10 days (plates 41-60)	10537	2
Solanum tuberosum	cSTB	leaves and petioles 8 weeks old plants	10327	4
Solanum tuberosum	cSTC	sprouting eyes from tubers 12-14 weeks post harvest	870	3
Solanum tuberosum	cSTS	sprouting eyes from tubers 12-14 weeks post harvest	9230	8

mRNA member sequences (22)

Alignment image suppressed for unigene with 22 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 4 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	4	Cytochrome_P450	973
2	22038	Cytochrome_P450	108
5	59713		6
1.1	101365	Cytochrome P450 - Molecular Function: monooxygenase activity (GO:0004497) - Molecular Function: iron ion binding (GO:0005506) - Biological Process: electron transport (GO:0006118) - Molecular Function: heme binding (GO:0020037)	908
2	118484	Cytochrome P450 - Molecular Function: monooxygenase activity (GO:0004497) - Molecular Function: iron ion binding (GO:0005506) - Biological Process: electron transport (GO:0006118) - Molecular Function: heme binding (GO:0020037)	90
5	130537		10

Preceding Unigenes (1)

Unigene	Build
SGN-U244276	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
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