Sol Genomics Network

Unigene SGN-U270222

Unigene Basic Information

Unigene ID:	SGN-U270222
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	270222
mRNA sequence:	Length: 1456 bp

>SGN-U270222 Solanum tuberosum #4 (4 members)
TTTTGTTCTTTGCGATTTGTGAGGAGAACGAAACGCATCTGAAAAATTCCATGGCAGCGCGCAGCAGCCGATATCGAAGATGAGATCAAG
GACGAGAAGAACCCACCACCACTTGATGACGATGATATTGCTCTACTCAAAACTTATGGCCTGGGACCTTATTCGACCAGCATAAAGAAA
GCCGAAAAGGAAATCAAGGAAATGGCCAAAAAGATAAATGATTTATGCGGTATTAAGGAGTCTGACACTGGGTTGGCTGCTCCAAGTCAA
TGGGATCTGGTTTCTGATAAACAGATGATGCAGGAGGAGCAACCTCTTCAGGTTGCTAGATGTACAAAGATAATTAGCCCCAACACTGAA
GATGCAAAATACGTGATAAACGTCAAGCAAATTGCAAAGTTTGTTGTTGGATTAGGTGACAAAGTTTCACCGACTGATATAGAAGAAGGC
ATGCGAGTTGGGGTTGATCGGAATAAATATCAGATTCAAATTCCTTTGCCTCCCAAAATTGATCCTAGTGTTACCATGATGACTGTTGAG
GAAAAGCCTGATGTGACATATAATGATGTTGGTGGATGCAAGGAACAAATTGAAAAGATGCGAGAGGTTGTTGAGTTGCCCATGCTTCAC
CCTGAAAAGTTTGTGAAACTTGGAATTGATCCCCCAAAGGGTGTTCTCTGCTATGGGCCTCCTGGTACTGGGAAAACACTGCTTGCTAGA
GCTGTGGCAAATCGAACAGATGCATGCTTTATTCGTGTTATTGGCAGTGAGCTTGTTCAGAAATATGTTGGTGAGGGAGCTAGGATGGTT
CGTGAACTGTTCCAGATGGCGCGCTCTAAGAAGGCGTGCATTGTCTTTTTCGATGAAGTAGACGCCATTGGTGGTGCAAGATTTGATGAT
GGTGTAGGTGGAGATAATGAGGTTCAGCGCACCATGCTTGAAATTGTGAACCAACTAGATGGATTTGATGCTCGGGGGAATATTAAGGTT
CTCATGGCCACCAATAGGCCCGATACACTTGATCCAGCATTGCTACGTCCTGGACGTTTGGATCGCAAAGTTGAGTTTGGTCTACCTGAT
CTAGAGAGTAGGACCCAGATATTTAAGATTCATACACGGACAATGAATTGTGAGCGCGATATTCGATTTGAACTTTTAGCACGTCTCTGT
CCAAACTCTACAGGAGCTGATATAAGAAGTGTGTGCACGGAGGCTGGAATGTATGCTATTCGAGCAAGGAGGAAAACTGTTACGGAGAAA
GACTTTTTAGATGCCGTCAACAAAGGTCATTAAAAGGGATATCAGAAAAATTCAGTGCAAACACCAAAGGTACATGGGTCTACAAATTAG
TTTGGACTACTTTCTATTTGGTCCAAACAATCAAGTGTTGGCCAGGAATGGAGTGACATTGCTATTTGCCATTTATTACCCGTGTACTCA
ATTTGATAATTTTTAC

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (4)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	ACDC	Sprouting Tubers	5177	1
Solanum tuberosum	CSCH	Tubers	5038	1
Solanum tuberosum	STOL	Stolon	6462	1
Solanum tuberosum	cSTD	dormant tuber one month post harvest	5045	1

mRNA member sequences (4)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 7 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	15	AAA_ATPase_centr	420
2	21987	26S_p45 AAA_ATPase_centr	260
5	57585	26S_p45 Sig54_interact AAA_sub AAA_ATPase_centr Pept_M41_FtsH	12
1.1	101385	AAA ATPase central region - Molecular Function: ATP binding (GO:0005524)	403
2	118424	AAA ATPase central region - Molecular Function: ATP binding (GO:0005524) AAA ATPase - Molecular Function: nucleotide binding (GO:0000166) - Molecular Function: nucleoside-triphosphatase activity (GO:0017111)	236
5	130420	26S proteasome subunit P45 - Cellular Component: nucleus (GO:0005634) - Cellular Component: cytoplasm (GO:0005737) - Molecular Function: hydrolase activity (GO:0016787) - Biological Process: protein catabolism (GO:0030163) AAA ATPase central region - Molecular Function: ATP binding (GO:0005524) AAA-protein subdomain - Molecular Function: ATP binding (GO:0005524) AAA ATPase - Molecular Function: nucleotide binding (GO:0000166) - Molecular Function: nucleoside-triphosphatase activity (GO:0017111)	10

Preceding Unigenes (1)

Unigene	Build
SGN-U244923	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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