Sol Genomics Network

Unigene SGN-U270262

Unigene Basic Information

Unigene ID:	SGN-U270262
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	270262
mRNA sequence:	Length: 1398 bp

>SGN-U270262 Solanum tuberosum #4 (18 members)
GACATTCATAGTTTTAATATTTTATATATCTAGCTATTTTCTTTGGGTTATATTTTATTTATTTATTTTGTTGAAATGGCAAAATCCCCA
GAAGAAGAACATCCAATTAAGGCTTTTGGATGGGCAGCTAGAGATACTTCTGGTGTTCTTACTCCTTTCAACTTCTCAAGAAGGGCTACT
GGGGAGAAAGATGTGCAATTCAAGATCTTGTATTGTGGAGTTTGCCACACAGATCTTCACTTTCTCAAGAATGAATGGGGAGTCACCAGA
TATCCTGTTGTACCTGGGCATGAGATTGTGGGTGTAGTGACAGAAGTTGGTAACAAAGTTGATAAATTTAAGATTGGTGACAAAATTGGT
GTTGGATGTCTAGTAGGATCATGTCAAAAATGTGACAATTGTGCAAATGATCTTGAAAATTATTGTCCCAAACAAATACAAACATATGGT
CAAATGTACATCGACGGAACGATGACGTACGGTGGTTACTCCGATATCATGGTTGTCGATGAGCATTTCGCGGTCCGTTGGCCGGAGAAT
TTACCGATGGAAGCTGCACCATTGTTATGTGCTGGTATCACAACTTATAGCCCATTGAAATATTATGGGCTTGATAAGCCTGGTTTGAAC
ATTGGTGTTGTGGGCCTTGGTGGGCTGGGCCATATGGCTGTGAAATTTGCTAAGGCTTTTGGAGCTAATGTCACAGTTATAAGTACTTCT
CCTAGTAAAGAAGAGGAAGCCCTTAAACATCTCGGTGCGGATAAGTTTTTACTTAGCAACAATCCTGAGCAAATTCAGGGTGCAATGAAC
ACATTGGATGGAATTATTGATACTGTTTCAGCAGTTCATCCACTTTTACCATATCTTGGTATGTTAAAGCCTCATGGTAAACATGTTATA
GTTGGTGCAATTCCTCAACCACTTGAAATGCCAGTGTTTCCTTTAATCTTGGGAAGGAAGACAATTGCTGGGAGTGCAATGGGAGGAATG
AAAGAGACTCAAGAAATGTTAGATTTTGCAGCAAAGCATAACATAACACCAGATGTTGAAGTCGTAGCGATGGACTACGTGAATACAGCG
TTGGAACGCCTTGTTAAATCCGATGTCAAGTATCGATTCGTGCTAGATGTGGGCAAAAAAATGAACAATGTTTAATCTCAAAACCAATTT
TTTTTGGTTCTTGAAAATCATTGTTGATCTTCTTGATGTTGTGTGTGTTTTTTAAGATATCTTGTTTTAGTATGTTAGTGTCTTTGCTTA
GTTATGTAAGTTGTTCACAACTTGAAAGACAAATAATTTGTTGTTTGCCTTATTTTATCCCAATCTTTAATGGCCCGCTCTGAAAAGCTA
AGTTTTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (8)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	MXLF	Leaves	6585	2
Solanum tuberosum	PPC	leaf 6 week old	5062	1
Solanum tuberosum	STM	mixed tissues	14805	3
Solanum tuberosum	STOL	Stolon	6462	1
Solanum tuberosum	cSTA	Axillary buds of stemp explants; swelling stolons; growing stolons; growing sink-tubers 1 to 3 days (plates 1-20), 4 to 6 days (plates 21-40), 7 to 10 days (plates 41-60)	10537	2
Solanum tuberosum	cSTB	leaves and petioles 8 weeks old plants	10327	7
Solanum tuberosum	cSTE	periderm and subperiderm 24 and 48 hour, and 5 and 7 day	5425	1
Solanum tuberosum	cSTS	sprouting eyes from tubers 12-14 weeks post harvest	9230	1

mRNA member sequences (18)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 2 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	100	Tdh Adh_zn_family	127
2	22202	Tdh ADH_zinc Adh_zn_family BchB	46
5	56416	Tdh ADH_zinc Adh_zn_family BchB	46
1.1	101421	GroES-like Alcohol dehydrogenase superfamily zinc-containing - Molecular Function: zinc ion binding (GO:0008270) - Molecular Function: oxidoreductase activity (GO:0016491)	210
2	118636	Alcohol dehydrogenase GroES-like Alcohol dehydrogenase superfamily zinc-containing - Molecular Function: zinc ion binding (GO:0008270) - Molecular Function: oxidoreductase activity (GO:0016491) Alcohol dehydrogenase zinc-binding GroES-like	41
5	129101	Alcohol dehydrogenase GroES-like Alcohol dehydrogenase superfamily zinc-containing - Molecular Function: zinc ion binding (GO:0008270) - Molecular Function: oxidoreductase activity (GO:0016491) Alcohol dehydrogenase zinc-binding GroES-like	41

Preceding Unigenes (2)

Unigene	Build
SGN-U245220	Solanum tuberosum #3
SGN-U248565	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
Event Type:
Event Description:
Event Web URL:

SGN is supported by , and hosted at
Cite SGN using | Disclaimer