Sol Genomics Network

Unigene SGN-U270335

Unigene Basic Information

Unigene ID:	SGN-U270335
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	270335
mRNA sequence:	Length: 992 bp

>SGN-U270335 Solanum tuberosum #4 (8 members)
GCTTTTCATTATTTCTCTCTCTTTGGGTCTTGTAAACCCTAAAAGGGGAGATATCTTTGGAGGTGGGCGGCCACTATTTATATCTAAGGT
CTTCAATTTTTCTCATTCATCACACCCACATCGTCAGTCAGTTCCAGTGAGGTTATTGGAGACTGAAATTTGAGATGGCTGCTATTTTAA
CTGCATCCTCTGGTCCAAGCTATGCACCAGAAGACCCTACTCTCCCCAACTATTTTGGTGCTCTCACCAACAAGAGAGTTAGCCACGCAG
ATACAAGCTGAAGCTGTGAAGTTTGGGAAATCCTCTAGGATATCTTGCACGTGCCTGTATGGAGGTGCTCCAAAAGGTCCTCAACTCCGA
GAGCTGAGTAGGGGTGTAGATATTGTTGTCGCCACTCCTGGTCGTTTGAATGACATATTGGAAATGAGAAGGCTTAGTCTTGGTCAAGTT
TCTTACCTGGTGTTAGATGAAGCAGATCGTATGCTAGACATGGGATTTGAACCTCAGATAAGAAAGATTGTGAAAGAGGTGCCTACGCAG
AGGCAGACATTGATGTATACAGCTACATGGCCGAAGGGGGTTCGTAAGATTGCAGCTGATCTATTGGTTAATTCAGTTCAGGTTAATATT
GGTAATGTTGACGAGCTTGTTGCAAACAAGTCTATAACACAGCACATTGAAGTCTTGTCTCCGATGGAGAAACAACGACGACTAGAACAA
ATCTTGAGATCCAATGAACCAGGGTCAAAGATCATTATCTTCTGTTCAACAAAGAAAATGTGTGACCAACTATCTCGCAATCTTACTCGC
AACTTTGGAGCAGCTGCAATTCATGGGGATAAATCTCAGGGGTGAGAGGGATTATGTATTAAGTCAGTTCCGCACTGGCAGGTCTCCTGG
TGCTTGTGGCTACTGATGTTGCTGCGCGGGGTTTAGACATCAAAGCATATCAAGGGTGGTGGTAAACTTTGACTTCCCAACTGGAATAGA
GG

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (6)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	ACDA	Tubers	5977	2
Solanum tuberosum	ACDC	Sprouting Tubers	5177	1
Solanum tuberosum	CSCH	Tubers	5038	2
Solanum tuberosum	PPI	leaf 6-week old leaf	5434	1
Solanum tuberosum	STM	mixed tissues	14805	1
Solanum tuberosum	TBSK	Tuber Skin	4812	1

mRNA member sequences (8)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 4 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	24	DEAD	331
2	21985	Helicase_C DEAD	273
5	56284	Helicase_C DEAD	133
1.1	101393	DEAD/DEAH box helicase N-terminal - Molecular Function: nucleic acid binding (GO:0003676) - Molecular Function: helicase activity (GO:0004386) - Molecular Function: ATP binding (GO:0005524) DEAD/DEAH box helicase - Molecular Function: ATP binding (GO:0005524) - Molecular Function: ATP-dependent helicase activity (GO:0008026)	340
2	118423	Helicase C-terminal - Molecular Function: nucleic acid binding (GO:0003676) - Molecular Function: helicase activity (GO:0004386) - Molecular Function: ATP binding (GO:0005524) DEAD/DEAH box helicase N-terminal - Molecular Function: nucleic acid binding (GO:0003676) - Molecular Function: helicase activity (GO:0004386) - Molecular Function: ATP binding (GO:0005524) DEAD/DEAH box helicase - Molecular Function: ATP binding (GO:0005524) - Molecular Function: ATP-dependent helicase activity (GO:0008026)	248
5	128963	Helicase C-terminal - Molecular Function: nucleic acid binding (GO:0003676) - Molecular Function: helicase activity (GO:0004386) - Molecular Function: ATP binding (GO:0005524) DEAD/DEAH box helicase N-terminal - Molecular Function: nucleic acid binding (GO:0003676) - Molecular Function: helicase activity (GO:0004386) - Molecular Function: ATP binding (GO:0005524) DEAD/DEAH box helicase - Molecular Function: ATP binding (GO:0005524) - Molecular Function: ATP-dependent helicase activity (GO:0008026)	106

Preceding Unigenes (2)

Unigene	Build
SGN-U245610	Solanum tuberosum #3
SGN-U245611	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
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