Sol Genomics Network

Unigene SGN-U270667

Unigene Basic Information

Unigene ID:	SGN-U270667
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	270667
mRNA sequence:	Length: 1561 bp

>SGN-U270667 Solanum tuberosum #4 (14 members)
GGAAAGTTCAAAGTCTTCCTCGCTTTTCCTTTCTGTGGTTACCTCTCAAAAAACCCAAATTCATCTGATCAATTTTTTGTTTGATCCTCC
CTATTAGTTGAAGCTTCTTTGAGATGGAGGAGGGCAAGATGTCTGAGGATATTTTGACTTCGGCTGCGGCATTTGTGGAAGGTGGAATTC
AGGATGCCTGCGATGATGCTTGCAGCATATGTCTTGAAGAATTTTCTGATAGTGATCCTTCTACAGTGACAGGCTGCAAGCATGAGTTCC
ATCTTCAGTGTATTCTAGAATGGTGTCAAAGAAGCTCCCAGTGCCCCATGTGTTGGCAACCTCTCAGCTTGAAAGACCCTAACAGCCAGG
AATTGTTGGATGCAGTAGAGCACGAGAGGAACATCAGGATGAATCCTCCTAGAAACACCACAATCTTTCACCATCCAACTTTAGGAGATT
TTGAGTTGCAGCATTTACCGGTAAGCGCAACTGACTCTGAGCTTGAAGAGCGTATCATTCAGCACTTAGCTGCCGCCGCTGCCATGGGAA
GGACACGCCACATTGCTAGAAGGGAAGGTCCGCGAGGTAGGTCATCAGCTCAAGGCCGTCCCCAATTTCTGGTGTTTTCAACTCATCCAA
ATGCTCCTCCTCTTGCTGGTGCTTCATCTTCTACTCAGAGGAGTGGGGGTGAACCCACTCCTGAAGTCTTGGTATCTGGTCAGGATTCTG
CAATTGTTTCTGGACAGCCAGTTACTCAACCATCTTCTTTTCAAGCTGATCAGGTTCCTGCCTCTGGGTCAGGATCAAATGCTGCTGTTA
ATCAGCTTGGGACTTCCTCAATCAATAGGACTCCTCCTCAATCTTCTTCTAACAATCAAGACAGAGCCGGACCATCAGATTTTCAGTCTT
TTTCAGATTCTATAAAGTCTCGATTTAGTGCAATGTCAATGAGATACAAAGAATCTTTAACAAAGAGTTCAAGGGGTTGGAAAGAGAAAT
TATTCTCTCGTAATAGTTCAACACCAGACCATTGTGCCGAATCTAGGAATGAAGTCAGTGCAGCTGTTGCCACTGTATCAAACCTAATGG
AGCATTTGGAAACAACTGATAGCAGAGCCAGTTCTGCTGAATCAAATATATCGGAGGACACTGTACCTGTCAGCCATGCTGAGCAGCATG
CACCTGTGATTGATAATACCCATTCTTTGAATGAGGATAATAGGCAAGCCCCATGTGCTGCAAGTTCTGGTTCGAGCTAAGTTTTGAATG
ACTCATAGCACTTTCTCTTAAAGGTGGATACTCCTGTCAACATCAGTAATATATATGATTGGATTTTATTGGATCTGTGGTGAACGGTAG
TACGTTGAAGTTCATCACTGAATGTAGCCTCTGCTTCAATAAAATAGGAATATGGATCCCATCATTTGGTCCAAGCCGTATATATGTAAT
GATAATATAGATGTAAATTGTCCTGTTCTGGATAGTACTGATTAATACAACTGTTTTCTTTAGATTTTACAAGAACCCTCCTTTATAATC
TTCGTTAAAAATTCTTAGATTAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (9)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	CSWB	Tubers	6124	1
Solanum tuberosum	MXFL	Floral buds	6603	1
Solanum tuberosum	MXLF	Leaves	6585	3
Solanum tuberosum	STM	mixed tissues	14805	2
Solanum tuberosum	STOL	Stolon	6462	1
Solanum tuberosum	SWST	Stolon	5942	2
Solanum tuberosum	TUBS	Tubers	5976	1
Solanum tuberosum	cSTA	Axillary buds of stemp explants; swelling stolons; growing stolons; growing sink-tubers 1 to 3 days (plates 1-20), 4 to 6 days (plates 21-40), 7 to 10 days (plates 41-60)	10537	2
Solanum tuberosum	cSTE	periderm and subperiderm 24 and 48 hour, and 5 and 7 day	5425	1

mRNA member sequences (14)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 2 | go: 5 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	10	Znf_ring	594
2	22460	Znf_ring	28
5	56885	Znf_ring	20
1.1	101372	Zinc finger RING-type - Molecular Function: protein binding (GO:0005515) - Molecular Function: zinc ion binding (GO:0008270)	566
2	119012	Zinc finger RING-type - Molecular Function: protein binding (GO:0005515) - Molecular Function: zinc ion binding (GO:0008270)	23
5	129952	Zinc finger RING-type - Molecular Function: protein binding (GO:0005515) - Molecular Function: zinc ion binding (GO:0008270)	14

Preceding Unigenes (2)

Unigene	Build
SGN-U246371	Solanum tuberosum #3
SGN-U252519	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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