Sol Genomics Network

Unigene SGN-U270725

Unigene Basic Information

Unigene ID:	SGN-U270725
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	270725
mRNA sequence:	Length: 1541 bp

>SGN-U270725 Solanum tuberosum #4 (17 members)
GTTAGCACTCTCACTCACTACATTTTCAAAGCTCCTCAACTTCGATTTCATCGAAAGAGACCTATATTAATTCTACTTTGAGAAATCTAA
ATCAGTTTATTTTCTTCTTTAAGCATTGTTTCTTCGTGTTCATCGACTTGAGATTCTTTTTTGTTGGAAATGGCTGCAAACACAACTCCT
GGCTTGCAAATACAAGCAACCAAACAATGCATTTCCGCATCTCAGAATATTTCGAAAATGAGCACTATGAGTTTCAGTTTTGGAAGTAAA
AGAAAATCTTTTAGTGATTTTAGAAGTTCATCACATATCTCGCTCACGAAGCCAATCCATAGCTTCAAATTGGCTCCTATAAAATTTGAA
AGGATGGTTACAAAAGCAATGTCTGGAGCTAGTGAACAAGTGCCAGTTTCAGGGTTGCCTATTGATCTGAGAGGTAAGAGGGCATTTATT
GCTGGCATAGCAGATGACAATGGGTATGGATGGGCAATAGCAAAGTCTCTTGCTGCTGCAGGGGCTGAAATTCTTGTTGGTACATGGGTG
CCTGCGCTCAACATTTTCGAGACCAGTCTGCGCCGTGGGAAATTTGACCAATCACGAGTGTTGCCTGATGGTTCATTGATGGAAATTGCA
AAAGTCTACCCATTGGATGCAGTTTTTGACAGTCCAGAAGATGTTCCTGATGATGTGAAAACAAACAAACGTTACGCCGGATCCTCAAAG
TGGACTGTCTCGGAAGTTGCTGAATCTGTAAAACAAGATTTTGGCACTATTGACATCCTTGTACATTCACTTGCAAATGGTCCAGAGGTT
AGCAAACTTCTATCGGAGACATCAAGAAAAGGATACCTTGCAGCTATATCTGCCTCCAGTTATTCCTTTATATCTCTACTAAAGTATTTT
CTTCCCATAATGAATCCAGGCGGTGCCACAATCTCTCTAACGTACATTGCTTCTGAAAGGATTATCCCTGGATATGGAGGCGGTATGAGT
TCGGCAAAAGCTGCTTTGGAGAGTGACACAAAAGTCCTGGCGTTTGAAGCTGGAAGAAAGCACAAAGTCAGAGTCAACACGATATCTGCA
GGTCCACTGGGAAGTCGTGCAGCAAAAGCTATTGGCTTTATCGACATGATGATAAATTACTCACTGGGAGAATGCTCCTTTGCAAAAGGA
GTTATATGCTGAGGAGGTCGGGAACACTGCTGCTTTTCTGGCATCTCCTTTGGCTTCAGCGATTACTGGTGCCACTGTGTATGTCGACAA
TGGTCTGAATGCGATGGGAGTTGGAGTTGACAGCCCAGCTTTCACAGGTCTCGACATCCCAAAAGATAATAAGAGCTAGTGCTAGAGGCA
ATGCTAGTATGGCTTTGGTGATCTAGAGAAACTTTGTTTTGTTATCTGTCATAGATTCCGGATAGCAATTGTTAGTGACATCGTATCTTT
TTCCAAAAGGTAACTTAATTTGTACGAGGCAATCTCAGTTTTAGCTGCGGTCCTCATTATTTATTGTCAGTGTGTTACCTGACTATCTAA
AAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (10)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	MXFL	Floral buds	6603	1
Solanum tuberosum	STM	mixed tissues	14805	4
Solanum tuberosum	STOL	Stolon	6462	1
Solanum tuberosum	SWST	Stolon	5942	2
Solanum tuberosum	TUBS	Tubers	5976	1
Solanum tuberosum	cPRO	roots in vitro grown stem cuttings	10187	1
Solanum tuberosum	cSTA	Axillary buds of stemp explants; swelling stolons; growing stolons; growing sink-tubers 1 to 3 days (plates 1-20), 4 to 6 days (plates 21-40), 7 to 10 days (plates 41-60)	10537	4
Solanum tuberosum	cSTB	leaves and petioles 8 weeks old plants	10327	1
Solanum tuberosum	cSTE	periderm and subperiderm 24 and 48 hour, and 5 and 7 day	5425	1
Solanum tuberosum	cSTS	sprouting eyes from tubers 12-14 weeks post harvest	9230	1

mRNA member sequences (17)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 2 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	17	Adh_short_C2	380
2	23159	ADH_short Adh_short_C2 Rib/Gal_isomrase	15
5	57330	ADH_short Adh_short_C2 Rib/Gal_isomrase	14
1.1	101390	Glucose/ribitol dehydrogenase - Biological Process: metabolism (GO:0008152) - Molecular Function: oxidoreductase activity (GO:0016491)	342
2	119817	Glucose/ribitol dehydrogenase - Biological Process: metabolism (GO:0008152) - Molecular Function: oxidoreductase activity (GO:0016491)	12
5	130137	Glucose/ribitol dehydrogenase - Biological Process: metabolism (GO:0008152) - Molecular Function: oxidoreductase activity (GO:0016491)	12

Preceding Unigenes (1)

Unigene	Build
SGN-U244950	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
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