Sol Genomics Network

Unigene SGN-U270761

Unigene Basic Information

Unigene ID:	SGN-U270761
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	270761
mRNA sequence:	Length: 1444 bp

>SGN-U270761 Solanum tuberosum #4 (17 members)
GATGATTTCATGAATTTCAACTTTATACAATTTTCTCTATCTTAAGCCATCTCTACATCATTCATATTCATACTAAATAAAACTACACTT
TTTTTTTTCTTTTCCCTTCCCAAGTTTACCCAAAAACCACAGATTAGTTATCACTTTCAAGTATCAAAATTCTTAGTTCTCAACTATGGG
TGGTGACAAGACTGAGAAGATTACCATAATGTTGCTAAAGGTTGATCTTCAATGTTCAAGCTGCTACAAGAAAGTCAAAAAAATTCTCTG
CAAATTCCCTCAAATTCGAGACCAAACGTATGATGAAAAGGCCAATATTGTCACCATCACTGTATTGTGTTGCAATCCTGAAAAAATTCG
TGATAAATTGTGTTGCAAAGGAGGGGGTGTAATCAAGAGCATTGAGATCAAAGAGCCTCAAAAGCCCAAGGAACCCGAAAAGCCCAAAGT
GCCTGAAAAGCCTAAAGAGCCCGAGAAACCCAAGGTGGTGATTGTGGAGAAGCCTAAAGAGCCTGAGAAACCCAAAGTAGTGGTCGTGGA
AAAGCCTAAAGAACCTGAGAAACCCAAAGTAGTGGTCGTGGAGAAGCCTAAAGAACCTGAGAAACCCAAAGTTGTAGTCGTGGAGAAGCC
TAAAGAACCTGAGAAACCTAAAGTAGTGGAAAAGCCTAAAGAACCGGAGAAACCCAAAATAGTGATGGTGGAGAAGCCTAAAGAGCCCGA
AAAGCCCAAACAACCCGTGAAACACAAGGAACCAGAAAAGCCAAAGGAGGTTCAGAAGCCCAAAGAGCCCGAGAAGCCCAAAGAAGCACC
TAAACCAACACCAATAGCTCTACCCCCACAACCACAACCACACTTCCCGCCAGTTCCAGAGCCAGTGATCGTGATGCCAATTCAAGGATA
TCCACACCAACCCTCTCCGGGGATGTATTGTTGTGGGCAATGTTACGGAGGCTATACTGGAGGCCCGTGTTATCATGATAATTGGTACGG
AAGACCAGTACAACCACCTCCACCACCACCATGCTACGACACATATTCATACGGTTATGGGCCCGGGCCCGGACACGGGCCCATACCGTA
TGGACTTCCAAAGGGATGTTATGTGAACAAATGCGATTACTTTAGTGAAGAGAATGCATCTGGATGCTCAATTATGTGAATCTATCATGT
TGGGCCATACTAGGGCCCATATTACATGTTAATTGGGTCTCCTCACCAAAAGTCCAAAACAAAGTTTGGATCTATCTGGCTTTCCATCTT
TTTGTATGTAGATTACGTATAGTAGAAAATAAATACATAAGTTCCTACTTTTAAAATAAAAGTTGATAAGAGAGAATAATTTGGTGACCA
GACTACTGGTTAACTGTCTTGTTACATAATTACTTAAAAAGTTTATTAATAAAAGCATTTTGTTAATCAAAAAAAAAAAAAAAAAAAAAA
AAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (10)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	CSCH	Tubers	5038	1
Solanum tuberosum	CSWB	Tubers	6124	3
Solanum tuberosum	IVROOT	Root	5850	2
Solanum tuberosum	MXFL	Floral buds	6603	1
Solanum tuberosum	PPC	leaf 6 week old	5062	1
Solanum tuberosum	STM	mixed tissues	14805	3
Solanum tuberosum	STOL	Stolon	6462	2
Solanum tuberosum	TBSK	Tuber Skin	4812	1
Solanum tuberosum	TUBS	Tubers	5976	1
Solanum tuberosum	cSTS	sprouting eyes from tubers 12-14 weeks post harvest	9230	2

mRNA member sequences (17)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 2 | go: 2 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	59	HeavyMe_transpt	218
2	22677	HeavyMe_transpt	22
5	56915	HeavyMe_transpt	20
1.1	101360	Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	4049
2	119117	Heavy metal transport/detoxification protein - Biological Process: metal ion transport (GO:0030001) - Molecular Function: metal ion binding (GO:0046872)	20
5	129729	Heavy metal transport/detoxification protein - Biological Process: metal ion transport (GO:0030001) - Molecular Function: metal ion binding (GO:0046872)	16

Preceding Unigenes (2)

Unigene	Build
SGN-U245695	Solanum tuberosum #3
SGN-U245696	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
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