Sol Genomics Network

Unigene SGN-U271157

Unigene Basic Information

Unigene ID:	SGN-U271157
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	271157
mRNA sequence:	Length: 1517 bp

>SGN-U271157 Solanum tuberosum #4 (16 members)
AAAGTTCAACGACTCGTATTTTTATCTTCCTGCATCTAATCAAAAAATCAGTCACAGCAAGAAGAACAACTGTGGAATAATGGCTTCCAG
GTATTGGGTGGTTTCTCTTCCCGTTCAGCAAAATTCGTCTACTACTTCTCTCTGGAGTCGCCTTCAAGAATCCATATCCAGGCATTCATT
CGACACTCCTCTTTATAGATTTAACATCCCCAATCTCCGTGTCGGTACATTGGATTCGCTTTTAGCTCTCAGCGATGATCTCGTCAAGTC
AAATAGCTTCATTGAAGGGGTCTGCTCCAAGACACGACGTCAGATCGAGGAATTGGAGAGAGTTTCTGGTGTCCTCAGTAGCTCTCTCAC
TGTAGATGGGGTTCCTGTTGACTCATACCTCACTAGGTTTGCATGGGATGAGGCAAAGTATCCCACAATGTCACCTCTTAAGGAGATTGT
GGATGGAATTCACAGCCAAGTTGCCAAGATTGAGGATGACCTTAAGGTTCGTGTTTCTGAGTATAACAATGTGCGCAGTCAACTTAATGC
CATCAACCGAAAGCAAACAGGAAGCTTAGCTGTCCGTGATCTGTCCAATTTGGTAAAGCCAGCAGATGTTGTTACCTCAGAACACCTAAC
AACTCTCCTTGCTGTTGTTTCTAAATACTCACAGAAAGACTGGTTATCCAGTTATGAGACCCTGACCACCTATGTGGTTCCCAGATCTTC
TAAGATGCTCTTTGAGGACAATGAATATGCTCTTTATACTGTAACATTATTCAACCGTGATGCCGACAATTTCAAGATTAAGGCGCGTGA
AAGAGGCTTCCAGATTCGCGATTTTGAACATAATCCAGAGACTCAAGAAAGTCGGAAACAAGAGCTGGAAAAACTGATGCAAGATCAAGA
GACATTCAGAAGCTCTCTGTTGCAGTGGTGCTATACCAGTTACGGGGAGGTTTTTAGCTCCTGGATGCACTTCTGTGCTGTGCGTATCTT
TGCTGAGAGCATTTTGAGATACGGGTTGCCTCCATCATTTTTGTCTGTTGTTTTGGCACCCTCAATCAAAAGTGAGAAAAAAGTACGTTC
CATTCTCGAGTCACTCTGCGACAGTTCAAACAGCAATTTCTGGAAAGCTGATGATGAAGGAGGAATGGCTGGTTTTGGAGGTGACACAGA
GGCTCATCCTTACGTCTCCTTCACAATAAATCTTGTTTGAGTTCGAGGAATGACTTTGTCTATCCATTGCATTGGTTTGATTCTAGTTGC
TATCATCAATAAGGGCAGGTTGCGCACTTGTACAATAGAGAGGATTGTCCAATTATTATTTTTTAATATTATATGCTTATTGTAAAACAT
ATTTATTTTTATTACCTTATCCTGCCTCCTTTATTGGCCGGGTTGATTGTATTCCAACTCTTGCTACTTCACTGGATCGAAAATTTTAAA
GTTATTTTGCTACGTATTGGAGACCTTTTTCCCAACTGAGAAATTAAATATTATTTGTTCTTGTTTTAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (10)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	CSCH	Tubers	5038	2
Solanum tuberosum	MXLF	Leaves	6585	1
Solanum tuberosum	STM	mixed tissues	14805	1
Solanum tuberosum	TBSK	Tuber Skin	4812	1
Solanum tuberosum	cPRO	roots in vitro grown stem cuttings	10187	2
Solanum tuberosum	cSTA	Axillary buds of stemp explants; swelling stolons; growing stolons; growing sink-tubers 1 to 3 days (plates 1-20), 4 to 6 days (plates 21-40), 7 to 10 days (plates 41-60)	10537	5
Solanum tuberosum	cSTB	leaves and petioles 8 weeks old plants	10327	1
Solanum tuberosum	cSTD	dormant tuber one month post harvest	5045	1
Solanum tuberosum	cSTE	periderm and subperiderm 24 and 48 hour, and 5 and 7 day	5425	1
Solanum tuberosum	cSTS	sprouting eyes from tubers 12-14 weeks post harvest	9230	1

mRNA member sequences (16)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 4 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	3346	V-ATPase_C Adeno_PIX	5
2	26331	V-ATPase_C Adeno_PIX	5
5	60326	V-ATPase_C Adeno_PIX	5
1.1	103731	ATPase V1 complex subunit C - Molecular Function: ATP binding (GO:0005524) - Biological Process: ATP synthesis coupled proton transport (GO:0015986) - Cellular Component: proton-transporting two-sector ATPase complex (GO:0016469) - Molecular Function: hydrolase activity acting on acid anhydrides catalyzing transmembrane movement of substances (GO:0016820)	5
2	122052	ATPase V1 complex subunit C - Molecular Function: ATP binding (GO:0005524) - Biological Process: ATP synthesis coupled proton transport (GO:0015986) - Cellular Component: proton-transporting two-sector ATPase complex (GO:0016469) - Molecular Function: hydrolase activity acting on acid anhydrides catalyzing transmembrane movement of substances (GO:0016820)	5
5	132270	ATPase V1 complex subunit C - Molecular Function: ATP binding (GO:0005524) - Biological Process: ATP synthesis coupled proton transport (GO:0015986) - Cellular Component: proton-transporting two-sector ATPase complex (GO:0016469) - Molecular Function: hydrolase activity acting on acid anhydrides catalyzing transmembrane movement of substances (GO:0016820)	5

Preceding Unigenes (1)

Unigene	Build
SGN-U245418	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
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