Sol Genomics Network

Unigene SGN-U271170

Unigene Basic Information

Unigene ID:	SGN-U271170
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	271170
mRNA sequence:	Length: 1843 bp

>SGN-U271170 Solanum tuberosum #4 (10 members)
AATTCGGCACGAGGGACAGCCGAAAGGAGAAACATTTCATATATGCTTTCCAGTCACATACTGGTGGACTACTGTTTACAAAGTTCGGAA
GTAACCAGACAGCATTGCTTGACCTTGCTTTTCCAGATAATTTTGGTAGGTTGCATGATAGAAGCAAAGAAACTCCTAAAACGATGAAGC
AGCTCACCCGTCTTTTCCCCAACAAAGTTACCATACAACTACCTCAGGATGAAGCATTATTATCTGACTGGAAACAGCAGCTGGAACGGG
ATATCGGAACTTTGAAATCTCAGTCAAACATTGCCAGCATTCGCAATGTTTTGAATCGTATAGGAATTGATTGCTCCGACCTCGAAACTT
TATGCATAAAAGATCAAGCATTAACAAGTGAGAGTGTGGAAAAGATAGTAGGCTGGGCCTTGGGCCATCACTTTATGCACAAATCTGAAT
CGCCAGTAAAAGAGGCCAAGCTGGTTATCTCCAGTGCAAGCATATCTTATGGTGTCAATATTTTCCAAGGGATCCACAATGAAACTAAGA
GTCTAAAAATATCTCTTAAGGATGTGGTTACTGAGAATGACTTTGAAAAGAGACTACTTGCGGACGTAATTCCGCCTAGCGATATTGGTG
TTACTTTTGGTGACATTGGAGCACTGGAAAATGTCAAGGATACTTTGAAAGAATTGGTGATGCTGCCACTTCAAAGACCTGAATTGTTTT
GTAAAGGACAGCTGACCAAGCCTTGCAAGGGAATACTGCTTTTTGGCCCCCCTGGTACTGGTAAAACAATGCTTGCAAAAGCTGTTGCAA
CCGAGGCTGGTGCAAACTTTATTAACATATCAATGTCAAGCATTACTTCAAAGTGGTTCGGTGAAGGAGAGAAGTATGTCAAAGCAGTCT
TCTCATTAGCTAGTAAAATAGCGCCTAGTGTTGTTTTTGTTGACGAGGTGGATAGCATGCTAGGAAGACGAGAAAATCCTGGTGAGCATG
AAGCAATGCGGAAAATGAAGAATGAATTCATGGTGAATTGGGATGGCTTGCGTACAAAGGACAAGGAGCGAGTTCTTGTACTTGCCGCAA
CTAATAGACCATTCGACCTTGATGAAGCAGTTATTAGGAGACTTCCACGGAGGTTGATGGTAAACTTGCCAGATGCTCCGAACAGGGAGA
AAATTTTGAGAGTGATATTGGCCAAGGAAGAGTTAATGCCAAATGTTGATCTGGAAGCTATCGCAAATATGACTGAAGGGTATTCCGGAA
GTGATTTAAAGAATTTATGTGTCACAGCTGCTCATTGCCCAATTAGAGAAATATTGGAGAAAGAGAAAAAGGAAAAAGCATTGGCAGTTG
CAGAGAGCAGGCCAGTCCCTGCATTGCATAGTAGTGTGGACGTTCGCCCCCTTAACAAGGATGATTTTAAATATGCACATGAACAGGTAT
GTGCTAGTGTATCTTCAGAATCGGCAAACATGAACGAGTTACTCCAGTGGAATGAATTGTATGGAGAAGGTGGATCAAGGAAGAAGAAAT
CTCTGAGCTACTTCATGTAGAGACATGTGAACTGTATAGTGTTGCTTTATTTATTTACCCAAGTGGGTAGCGACGGGTCCTGCATGCATG
GAAAAAATCCATTTCAGGTTCCCTGGAGTCCAAACCCCCCCACCCCGGAAAACTGTGTATCATAGTTAGTTATAGTTATTTATCTCCGGT
TATGAAATATCTATCCGAAGCTTGTCTTCCAATTTTCACCTTATTAGATCTCCTCACCTCTGTATATACAATTTGATTTATTTAATAAAT
AAACATCCCCATGCTCTAAAAAAAAAAAAAAAAAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (7)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	MXFL	Floral buds	6603	1
Solanum tuberosum	MXLF	Leaves	6585	3
Solanum tuberosum	PPC	leaf 6 week old	5062	1
Solanum tuberosum	PPI	leaf 6-week old leaf	5434	1
Solanum tuberosum	STM	mixed tissues	14805	2
Solanum tuberosum	TUBS	Tubers	5976	1
Solanum tuberosum	cSTB	leaves and petioles 8 weeks old plants	10327	1

mRNA member sequences (10)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 3 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	15	AAA_ATPase_centr	420
2	21987	26S_p45 AAA_ATPase_centr	260
5	56410	26S_p45 AAA_ATPase_centr Pept_M41_FtsH	48
1.1	101385	AAA ATPase central region - Molecular Function: ATP binding (GO:0005524)	403
2	118424	AAA ATPase central region - Molecular Function: ATP binding (GO:0005524) AAA ATPase - Molecular Function: nucleotide binding (GO:0000166) - Molecular Function: nucleoside-triphosphatase activity (GO:0017111)	236
5	129063	AAA ATPase central region - Molecular Function: ATP binding (GO:0005524) AAA-protein subdomain - Molecular Function: ATP binding (GO:0005524) AAA ATPase - Molecular Function: nucleotide binding (GO:0000166) - Molecular Function: nucleoside-triphosphatase activity (GO:0017111)	49

Preceding Unigenes (2)

Unigene	Build
SGN-U250041	Solanum tuberosum #3
SGN-U260683	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
Event Type:
Event Description:
Event Web URL:

SGN is supported by , and hosted at
Cite SGN using | Disclaimer