Sol Genomics Network

Unigene SGN-U271243

Unigene Basic Information

Unigene ID:	SGN-U271243
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	271243
mRNA sequence:	Length: 1376 bp

>SGN-U271243 Solanum tuberosum #4 (11 members)
CATTTGGGAAGAGAGGTAGAGGATGAGCACTCACATCCTCTGTTTTCATCTTATTCCTAAAATATTAATAATAATAACTATATAGCTATA
TACACCTCTTTAGATCTCTGGTTATAGTTTCTACCATTTTCCCAATTTGGGTTTTTTCTTGAAAAATGTTCAATCTTTACAAATGATACA
TTGGATTGTTTTTTGATTGATGGTACAAGGATCCATGTTCTTGGATTGAATCCAACACTTTCCCCTTGCTGTTTGATCAGTATTCCCACC
TGGAGTCTGCCTGATTTGCTAGATAAGAAATGATGGAGTCAGATCTTGGTAAGCTATTCATAGGTGGGATTTCTTGGGACACAGATGAGG
ATCGTCTTAAAGAATATTTCAGTTCATATGGAGAAGTGGTGGAAGCTGTGATCATGAGGGATCGTAATACTGGCCGTGCTCGTGGTTTTG
GTTTTGTTGTATTTGTTGATCCTGTTGTTGCTGAAAGAGTAGTTAAGGAGAAGCATATGATTGATGGACGAACGGTTGAGGCAAAGAAGG
CTGTTCCTAGGGATGATCAACAAATAATAAATAGAAACAATAGCAGCATTCAAGGATCTCCAGGTGGTGGACGCACAAAAAAGATATTTG
TAGGAGGCTTAGCATCTACTGTCACGGAGAGTGATTTTAAGACATACTTTGATCAATTTGGTACAATTACAGATGTCGTAGTGATGTATG
ACCATAATACTCAGAGGCCAAGAGGGTTTGGATTTATAACTTATGATTCGGAGGAAGCAGTTGATAGGACATTGTTTAAGTCTTTTCATG
AACTAAATGGTAAACTGGTTGAAGTAAAGCGTGCTGTACCAAAGGAGCTATCTCCAGCGCCTAGCCGTAGCCCTTTCATGGGATACAACT
ATGGACTCAATAGAACCAACAACTTCCTCAACAACTATGCTGCTCAGGGTTATAATCTAGCGTCGGTTGGAGGATATGGGGTCAGGATGG
ATGGCAGGTTTAGTCCAGTTGCCGGTGCTCGTGCCGGTTTCTCTCAGTTTGCTTCTCCTGCTTATGGAATGGGTGTCAATTTGGACCCGG
CATTGAGCCCCACCTTTGCAGGAGCTTCCAACTTTAGCAATAATCTTGGTTATGGACGGATACTTAACCCATATTTCGGTGCAAATTCAA
GCAGATACACTACTCCTATTGGATACAGCACAAGCAACAATAGAGCGGATTCTTTTCTAAGCTCCCCAAACAGGAATTTATGGGGAAATA
TTGGGCTCAATGCTTCAGCAAGTTCTGGTGGTCCAGGTTCATTTTGTAGGCTCTGGAAGCGGAAATTATGGCGTCTTTGGGAATAACAAT
GCTAATTGGGGCTCTCTTATTTCCGT

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (4)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	IVROOT	Root	5850	1
Solanum tuberosum	MXLF	Leaves	6585	1
Solanum tuberosum	cSTA	Axillary buds of stemp explants; swelling stolons; growing stolons; growing sink-tubers 1 to 3 days (plates 1-20), 4 to 6 days (plates 21-40), 7 to 10 days (plates 41-60)	10537	7
Solanum tuberosum	cSTD	dormant tuber one month post harvest	5045	2

mRNA member sequences (11)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 1 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	3	RNA_rec_mot	1201
2	21977	RNA_rec_mot	370
5	56421	RNA_rec_mot	45
1.1	101362	RNA-binding region RNP-1 (RNA recognition motif) - Molecular Function: nucleic acid binding (GO:0003676)	1383
2	118414	Nucleotide-binding alpha-beta plait - Molecular Function: nucleotide binding (GO:0000166) RNA-binding region RNP-1 (RNA recognition motif) - Molecular Function: nucleic acid binding (GO:0003676)	322
5	129111	Nucleotide-binding alpha-beta plait - Molecular Function: nucleotide binding (GO:0000166) RNA-binding region RNP-1 (RNA recognition motif) - Molecular Function: nucleic acid binding (GO:0003676)	40

Preceding Unigenes (1)

Unigene	Build
SGN-U245197	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
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