Sol Genomics Network

Unigene SGN-U271286

Unigene Basic Information

Unigene ID:	SGN-U271286
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	271286
mRNA sequence:	Length: 1537 bp

>SGN-U271286 Solanum tuberosum #4 (8 members)
ATTCATTTCTACTATTTTTCTCAAACAAATTTATCCCCAAAATATGGATGTTTCAGCTCCGCAAATGGACACGATGATGCCGGATGTGGC
TGCCCCTGCGGTTCAGCAACCACCTCCACCACCGCAACCGCTGCCCGGAATGGATAATATTCCGGCGACGTTAAGCCATGGTGGCAGGTT
CATTCAATACAACATATTTGGTAATATTTTTGAAGTTACTGCTAAGTATAAACCTCCTATTATGCCTATTGGTAAAGGTGCTTATGGAAT
CGTTTGTTCTGCTTTGAATTCGGAGACAAATGAAAATGTAGCAATTAAGAAAATTGCTAATGCTTTTGATAACAAGATTGATGCTAAGAG
GACTTTGAGAGAGATCAAGCTTCTTCGACATATGGATCATGAAAACATTGTTGCGATCAGAGATATAATTCCACCACCACAGAGAGAAGC
CTTTAATGATGTTTATATTGCATATGAGCTTATGGATACTGATCTCCATCAAATTATTCGCTCGAATCAGGGTTTATCTGAGGAGCACTG
CCAGTATTTCTTGTATCAGATCCTCCGTGGGTTGAAATACATACATTCTGCAAATGTTTTGCACAGAGACTTAAAGCCTAGCAATCTTCT
CTTGAATGCCAACTGTGATTTGAAGATATGTGATTTTGGGCTAGCTCGTGTCACTTCTGAAACCGACTTTATGACCGAATATGTCGTGAC
AAGATGGTATCGTCCACCTGAGCTGTTGTTGAATTCATCCGACTATACTGCAGCAATTGATGTATGGTCAGTGGGTTGCATCTTCATGGA
GTTGATGGACAGAAAACCCCTCTTCCCTGGCAGAGATCATGTACACCAGCTGCGTCTTATTATGGAGTTGATTGGCACTCCTTCAGAGGC
TGAAATGGAGTTTTTAAATGAGAATGCAAAACGATACATCCGACAACTTCCTCTTTACCGTCGACAATCATTTACTGAAAAGTTCCCGCA
TGTAAACCCAGCTGCTATTGATCTTGTCGAGAAAATGTTGACATTTGATCCCAGAAGGAGAATAACAGTTGAAGACGCACTTGCACATCC
TTACCTAGCATCGCTTCATGATATCAGTGACGAGCCCATTTGCATGACTCCTTTTAATTTCGACTTTGAACAACATGCCCTTACAGAGGA
ACAGATGAAGGAGCTGATTTACAGGGAGTCTATTGCATTTAATCCTGAATACCAGCGCATGTGAATAATCGCTGACAGATTGTTGCAGGT
TTGATCTACATGTTATGTGTAACTGACAATTTATCCCCCCATGTATATATGTGTGCATTCCGTCCGGGAACATGGATGAGTTTCTTATGC
AAACACTTAGTAATGAAGCTGACTTGTGTATGGAGAGTTGTTTGATGTATCTTATGGGGTGGATCGTTTGTGTTTTATTTAGACTGAAAT
GAAATTCTGGTGGACAATATCTGTGTCAGATGTTTCTATTGTCATTGATATTCTTATTTCAAAAAAAAAAAAAAAAAAACTCGAGACTAG
TTCTCTC

[Blast] [AA Translation]

Associated Loci (2)

Locus symbol	Locus name	Gene activity
stmpk2	mitogen-activated protein kinase 2	protein kinase
stmpk1	mitogen-activated protein kinase 1	protein kinase

Genomic locations (0)

None

Library representation (6)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	IVROOT	Root	5850	1
Solanum tuberosum	PPI	leaf 6-week old leaf	5434	1
Solanum tuberosum	STM	mixed tissues	14805	1
Solanum tuberosum	cPRO	roots in vitro grown stem cuttings	10187	3
Solanum tuberosum	cSTB	leaves and petioles 8 weeks old plants	10327	1
Solanum tuberosum	vSTmRNA		708	1

mRNA member sequences (8)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 6 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	2	Prot_kinase	1610
2	21980	Prot_kinase	311
5	56279	Prot_kinase	147
1.1	101361	Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468) Protein kinase-like	1515
2	118420	Protein kinase-like Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	253
5	128957	Protein kinase-like Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	116

Preceding Unigenes (2)

Unigene	Build
SGN-U245757	Solanum tuberosum #3
SGN-U263505	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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