Sol Genomics Network

Unigene SGN-U271287

Unigene Basic Information

Unigene ID:	SGN-U271287
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	271287
mRNA sequence:	Length: 1620 bp

>SGN-U271287 Solanum tuberosum #4 (7 members)
CAAACTTCACTTTCTCCAGAACACACATTTTTTCACACACAAACAGAAAGAGCTAAAAGGACTGAAATAGGAAAAAAGACGGCAAATTTG
ATTCTAGGGTTTACTATTTACGGTAAAAATGGATGGTTCAGCTCCGCAAACGGACACGGTGATGTCGGATGCGGCGGCGGGACAGCAGCC
AGCTACGCCGCCGTTGCCGATGGCCGGAATGGAGAACATTCCTGCGACGTTGAGTCACGGTGGCCGGTTTATTCAATACAACATTTTTGG
TAATATATTTGAAGTTACTGCAAAGTATAAGCCTCCAATTATGCCAATCGGTAAAGGAGCTTATGGTATTGTTTGTTCTGCTTTGAATTC
GGAGACAAATGAACATGTTGCAATAAAGAAAATTGCGAATGCTTTTGATAACAAAATTGATGCCAAGAGAACTTTGCGTGAGATCAAGCT
TCTTCGACATATGGATCATGAAAATATTGTTGCGATCAGAGATATAATTCCACCACCTCAAAGAGAAGCATTTAATGATGTCTATATTGC
ATATGAGCTTATGGACACTGATCTCCATCAAATTATTCGGTCTAATCAAGGATTATCAGAAGAACATTGCCAGTATTTCTTGTATCAGAT
CCTCCGTGGGTTGAAATACATACATTCTGCAAATGTTTTGCATAGGGACTTGAAGCCTAGCAATCTCCTCTTGAATGCCAATTGTGATTT
AAAGATATGTGATTTTGGGCTAGCTCGTGTCACTTCTGAAACTGACTTTATGACCGAATATGTTGTGACAAGATGGTACCGACCTCCGGA
GTTGTTGTTAAATTCTTCTGACTATACTGCAGCTATTGATGTCTGGTCAGTTGGTTGCATTTTCATGGAACTGATGGACAGAAAGCCTCT
GTTTCCTGGTAGAGATCATGTACACCAGCTACGTCTGCTTATGGAGTTGATTGGCACCCCGTCTGAGGCTGAAATGGAGTTTTTGAATGA
GAATGCAAAGCGGTACATCAGACAACTTCCTCTTTACCGTCGACAATCATTTGTCGAAAAATTTCCACATGTAAACCCTGCTGCTATTGA
TCTTGTTGAGAAAATGTTGACATTTGATCCCAGAAGGAGACTTACTGTTGAAGGCGCGCTTGCACACCCTTACCTAACATCGCTTCATGA
TATTAGTGACGAGCCCGTTTGCATGACTCCTTTTAGCTTCGATTTTGAACAGCATGCCCTTACCGAGGAACAAATGAAAGAGCTGATTTA
CAGGGAGGGTCTTGCATTTAATCCCGAATACCACCAGCACATGTGAGTACTCGCTCGTTTGCTGTTGGATCGTCTGTGTGGCTTTCATTT
TTTAATGCAACCAGGTCATTATATCTCCATGTATATACATGTCTTTTTGAACGTTTTATATGTAGCATGACCTGTGTATGACCATTGTTT
TCCTGTACTCTAAGAGGTGGTTCACTTGTATCAGTATTTTTTAGTCCCAGAAATGTAATCTTTCTGCTATTGGATTTCTATCCCTTTGTC
ACTTCTCATGCTTTGATACTGATTCACTGTGATACTATTGATTTTTAATTCTGAGTTTAATGCTTTTCTTGTAAAAAAAAAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (2)

Locus symbol	Locus name	Gene activity
stmpk2	mitogen-activated protein kinase 2	protein kinase
stmpk1	mitogen-activated protein kinase 1	protein kinase

Genomic locations (0)

None

Library representation (6)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	MXLF	Leaves	6585	1
Solanum tuberosum	STM	mixed tissues	14805	2
Solanum tuberosum	cSTA	Axillary buds of stemp explants; swelling stolons; growing stolons; growing sink-tubers 1 to 3 days (plates 1-20), 4 to 6 days (plates 21-40), 7 to 10 days (plates 41-60)	10537	1
Solanum tuberosum	cSTB	leaves and petioles 8 weeks old plants	10327	1
Solanum tuberosum	cSTS	sprouting eyes from tubers 12-14 weeks post harvest	9230	1
Solanum tuberosum	vSTmRNA		708	1

mRNA member sequences (7)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 6 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	2	Prot_kinase	1610
2	21980	Prot_kinase	311
5	56279	Prot_kinase	147
1.1	101361	Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468) Protein kinase-like	1515
2	118420	Protein kinase-like Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	253
5	128957	Protein kinase-like Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	116

Preceding Unigenes (1)

Unigene	Build
SGN-U245758	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
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