Sol Genomics Network

Unigene SGN-U271354

Unigene Basic Information

Unigene ID:	SGN-U271354
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	271354
mRNA sequence:	Length: 1607 bp

>SGN-U271354 Solanum tuberosum #4 (5 members)
GAGGAGATTGTTCGCCCTGTTGCCAATTTCTCTCCAAGTCTTTGGGGTGATCGTTTCCATTCATTCTCTCTCGACAATCAGGTTGCTGAA
AAGTATGCTCAAGAGATTGAAACTTTGAAGGAACAAACAAGGAGTTTGTTGTCTGCTGCTGCTTGTGGAATAACATTGGCTGAGAAATTG
AATCTGATAGACATTGTTGAGCGCCTTGGCTTAGCTTATCATTTTGAGAAACAAATAGATGATATGTTGGATCAAATTTACAAAGCAGAT
CCCAACTTTGACGCTCATGATTTAAACACTTTATCCCTTCAATTTCGAATATTAAGACAACATGGTTACAATATCTCCCAAAAATTTTTC
AGCAGATTCCAAGATGCGAATGGCAAGTTCAAGGAATCTCTTAGCAACGACATCAGGGGTCTATTGAACTTATACGAAGCTTCACATGTA
AGGACTCATGGAGAAGATATTTTAGAAGAGGCACTTGTTTTCTCCACTGCTCATCTCGAGTCTGCAGCTCCAAATTTGGAGTCACCTCTG
AGTAAGCAAGTGACTCATGCCCTTGAGCAGTCTCTCCATAAGAGCATTCCAAGAGTCGAGACGCGTTACTTCATCACCATCTACGAAGAG
GAGGAATTTAAGAATGATGTGTTGCTTCGATTTGCCAAATTGGATTACAACTTACTCCAGATGTTGCACAAACACGAACTTAGTGAAGTA
TCAAGGTGGTGGAAAGATTTGGATTTTGTGACAACGCTTCCATATGCTAGGGATAGAGCAGTGGAATGTTACTTTTGGACGATGGGAGTG
TATGCTGAACCTCAATACTCTCAGGCTCGTGTCATCCTTGCAAAGACTATAGCAATGATTTCGATAGTAGATGACACATTCGATGCTTAT
GGAATAGTAAAAGAACTTGAGGTCTACACCGATGCCATACAAAGTCAAATTGATCGACTCCCAGAATACATGAAAGTTAGTTTTAAGGCT
CTTTTGGATCTCTATGAAGATTATGAAAAGGAGTTGTCAAAGGATGGCAGATCCGATGTTGTCCACTACGCAAAAGAAAGAATGAAGGAG
ATTGTGAGAAACTATTTTGTAGAAGCAAAGTGGTTCATTGAGGGATATATGCCGCCTGTTTCTGAGTATCTTAGCAATGCATTAGCTACC
AGCACATATTACTTGCTAACTACAACATCCTATTTGGGAGTGAAGTCAGCAACAAAGGAAGATTTTGAATGGTTGGCTACGAACCCTAAA
ATTCTTGAAGCCAATGTGACATTATGCCGAGTTGTTGATGACATAGCAACGTATGAGGTTGAGAAGGGTAGGGGCCAAATCGCAACAGGA
ATTGAGTGTTATATGAGGGATTATGACGTATCAACAGAAGTAGCAATGGAAAAATTCCAAGAGATGGCTGAGATAGCATGGAAGGATGTA
AATGAAGGAATTCTTCGACCAACACCTGTCTCTACAGAAATTCTTACTCGCATTCTCAATCTTGCTCGTATTATAGATGTCACTTACAAG
CACAATCAAGATGGATACACTCATCCCGAAAAAGTTCTAAAACCTCACATCATTGCTTTACTGGTGGACTCCATTGA

[Blast] [AA Translation]

Associated Loci (2)

Locus symbol	Locus name	Gene activity
pvs3	vetispiradiene synthase 3	vetispiradiene synthase
pvs2	vetispiradiene synthase 2	vetispiradiene synthase

Genomic locations (0)

None

Library representation (2)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	PPC	leaf 6 week old	5062	2
Solanum tuberosum	vSTmRNA		708	3

mRNA member sequences (5)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 2 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	97	Terpene_synth_C Terp_synth-like	129
2	22034	Terpene_synth_C Terp_synth-like	113
5	56326	Terpene_synth_C Terp_synth-like	77
1.1	101439	Terpenoid cylases/protein prenyltransferase alpha-alpha toroid	162
2	118467	Terpenoid synthase Terpene synthase metal-binding	109
5	128968	Terpenoid synthase Terpene synthase metal-binding	103

Preceding Unigenes (2)

Unigene	Build
SGN-U260832	Solanum tuberosum #3
SGN-U260835	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
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Start Date:
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