Sol Genomics Network

Unigene SGN-U271455

Unigene Basic Information

Unigene ID:	SGN-U271455
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	271455
mRNA sequence:	Length: 1253 bp

>SGN-U271455 Solanum tuberosum #4 (14 members)
CTTAAAAAAAATGTTCCAAACCTTGAAAAACGAATTTCAAATTTGCGAAGAAATCGGCCGTGGTAGATTCGGTACCGTCTACCGCTGCTT
TTCTCCGGCGACCGGAGAATCTTTCGCCTGTAAATCTATCGACAAAAACCTCCTCATTGATTCCACCGACCGTGAGTGTCTCGATAAAGA
ACCCAAAATTCTTCAACTCCTTTCCGGTAACCCCAACATTCTCCATCTTTACAAGGTTTATGAAGATGACCATTTCCTTCACATGGTAAC
CGATTTCTGCCCGAATAGCGATTTATACGAAAGGGTTTCATCTGGGTCGTTGTCAGAATCGGCTGCCGCGGCTATTCTGACTCAGTTGGT
TTCTGCGATTAGCTATTGTCATCATATGGGTGTAGCTCATCGTGATATTAAGCCGGATAATGTGTTGTTTGATTCTGAGAATAGATTGAA
GCTTGCTGATTTTGGATCTGCGGAGTGGTTTGCGGGTTGTGAAGGGAGGATGATGAGTGGGGTTGTGGGTACGCCGTATTATGTTGCGCC
GGAGGTTTTGATGGGGAAAGAGTATAATGAGAAGGTTGATGTGTGGAGTGTGGGGGTTATTTTGTATATTATGCTTTCTGGGGTTCCTCC
TTTTTATGGTGAAACGCCGACTGAGACTTTTCAAGCTGTTCTCAGAGGGAATTTGAGGTTTCCGACGAGGAATTTCAGGTCAGTTTCGTC
TGAAGCGAAAGATTTGTTGAGGAAGATGATATGTAAGGATGTTTCCAGACGATTTTCAGCTGAACAAGTACTGAGACACCCATGGGTGAT
TAATGGAGGAGAAACAAGATCAATGGCTGATCTAAACTGATGAAGAAGAAGATTACTGGTTTTTCCCTAACAACTCTATAAATACTACTG
ATAAGTTCTTGCTGTATATACATCAATGTCACAAGCTCCATGTGAAAAGGAAGAAAATGAGGAGAAAGATAAGCTCTTTCTTGGTATGAT
ATCAATTCTACAACAAGGGGTTCCCTCTTTTAACTTTTTTTCTCCTTTGAGATGTTGTTACTGTGTTGTGGAGAAGAATCTGAAGAGGAT
AATGAATCTCCTAAAAAAAAAAAAGTTTTCTGGCTATGTAGAAATAGATGATTTTCCCACTTTTATGTGTTTTTTTGGTATATGAAAGGT
TGTGGAAGAGAAGGAAGGATAAGTGTTTATCCTTCAAGTTTTGTTTTAGAGGAGCACTATGTATTTGTAATAATAAAGTTTGC

[Blast] [AA Translation]

Associated Loci (1)

Locus symbol	Locus name	Gene activity
ppck1	phosphoenolpyruvate carboxylase kinase 1	phosphoenolpyruvate carboxylase kinase

Genomic locations (0)

None

Library representation (7)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	ACDA	Tubers	5977	4
Solanum tuberosum	CSCH	Tubers	5038	1
Solanum tuberosum	CSWB	Tubers	6124	1
Solanum tuberosum	MXFL	Floral buds	6603	1
Solanum tuberosum	SWST	Stolon	5942	2
Solanum tuberosum	cSTD	dormant tuber one month post harvest	5045	3
Solanum tuberosum	vSTmRNA		708	2

mRNA member sequences (14)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 5 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	2	Prot_kinase	1610
2	21972	Prot_kinase	672
5	56274	Prot_kinase	178
1.1	101361	Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468) Protein kinase-like	1515
2	118408	Protein kinase-like Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	587
5	128946	Protein kinase-like Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	159

Preceding Unigenes (1)

Unigene	Build
SGN-U250865	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
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