Sol Genomics Network

Unigene SGN-U271609

Unigene Basic Information

Unigene ID:	SGN-U271609
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	271609
mRNA sequence:	Length: 1916 bp

>SGN-U271609 Solanum tuberosum #4 (9 members)
CACAGTAGAAGCACCCCACCCCCACCACGAACCCAACAAAACTTATCTGTCTTGGATTGAAGTTTTCAAGCTTTACAAAGTGAGAATTGT
TAAATAATGGCAGTAGTGGCCTCTGCTCCTGGAAAGGTTTTGATGACTGGAGGTTATCTTGTTCTGGAGAGGCCAAATGCTGGTATTGTA
CTGAGCACAAATGCTCGTTTTTATGCTATTGTGAAGCCACTTTATGACGAAATTAGACCTGAAAGTTGGGCATGGGGTTGGACAGATGTT
AAATTGACTTCTCCCCAGATGGCAAGACAAACCATGTATAAACTGTCTCTTAAACACCTAAAGCTTCAGCCTGTTTCTTCAAGTGGATCA
AGAAACCCCTTTGTAGAACATGCAGTGCAGTATGCTGTTGCAGCAGCCCATGCAACACTTGACAAAGATAAGAAGGACACATTGCAGAGA
CTACTTCTGCAGGGTCTTGACATAACTATCTTGGGTTGCAATGAGTTCTATTCGTATCGGAATCAGATTGAAGCACGTGGGCTCCCTCTT
ACACCTAAGTCATTGGCTTCCCTTCCACCTTTTGCTTCGATCACCTTTAATGCAGAAGAATCAACTGGAGAAAATTGCAAGCCTGAAGTT
GCAAAGACTGGATTAGGGTCGTCAGCAGCTATGACAACTGCAGTTGTTGCCGCCTTGCTTCATTATCTTGGCGTTGTGAACCTCTCCTCT
TTGGATGAGGACCAACTCCAAGGAAAGAAAGATGTAGCTGATCTTGATGTAGCTCATGTGATAGCTCAAACTGCTCATTGCATTGCACAG
GGTAAAGTTGGCAGTGGGTTTGATGTTAGTTCTGCAGTTTATGGAAGTCAACGCTATATCCGGTTTTCGCCTGAAGTGCTCTCTTCTGCG
CAGAATGCAGGTATGGCAACACCACTAATAGNAAGTCATTGATGATGTCCTAAAAGCAAAGTGGGACCATGAGAGGACCAAGTTTTCATT
GCCTCCTTTAATGACATTATTACTTGGAGAACCGGGCTGTGGAGGATCTTCAACACCATCAATGGTTGGAGCTGTTAAGAAATGGCAGAG
GTCCGACCCTCAGGATTCTCTAGAAACATGGAGAAGGTTGTCAGAAGGAAACTCTGCTCTTGAAGCGCATCTAAATACCTTAAGTAAATT
GGCAGAGAGACATTACAATGCTTATGAATGCATCATCAATGCCTGCAGCCTGCTTCCTGCTGAAAAGTGGTTGGAGAGAGCAAATGAACC
AACTCAAGCAGAAATTGTTAAAGAATTATTAGGAGCTCGAGATGCTATGCTTCGGATTAGGTATCAGATGCGGAAGATGGGAGAAGTTGC
TGGAATTCCAATAGAACCAGAATCGCAATCTCAGCTTCTAGATGCTACAATGAATATGGAGGGAGTCTTGTTGGCTGGCATTCCTGGTGC
AGGTGGATTTGATGCAGTTTTTGCAGTTACCCTGGGGGCTTCAAGCCAAAATGTGACTCAAGCTTGGAGTTCACTTAATGTTCTTGCAAT
GCTAGTAAGAGAAGATCCTCATGGTGTGTCCTTGGAAAATAACGATCCTCGAGCAAAGGAAATTACTACAGCTGTTTCTGCAATTCAGCT
TGAATAATGATCTGGAAGTTGTAGATCACTTGCAGTAGCTTACTTTACTCGTGCCATATGACTAAAACATAAGATCTTAAAATATTAGAA
TGTATAGATTGCCTTTCTCGTTCAGGTAGGTTGAAGTTTCAAAACTGCAGATCATAGTGACCTCCTCCTATTGTTTGAAGAGGGCAAATA
TGTGCCACGAAAAAATAAGCCAAATGAGAGCCTGCTCTAGTTCTATGGTTCATTGAATCAAAAAATAAATCTTGCTGGAAATGAATTTCC
CATTTACTTCATAGTTNNNAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (4)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	STM	mixed tissues	14805	5
Solanum tuberosum	cPRO	roots in vitro grown stem cuttings	10187	1
Solanum tuberosum	cSTA	Axillary buds of stemp explants; swelling stolons; growing stolons; growing sink-tubers 1 to 3 days (plates 1-20), 4 to 6 days (plates 21-40), 7 to 10 days (plates 41-60)	10537	2
Solanum tuberosum	cSTS	sprouting eyes from tubers 12-14 weeks post harvest	9230	1

mRNA member sequences (9)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 6 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	1777	GHMP_kinase Pmev_kin_Gpos Mev_gal_kin Pmev_kin_erg8	10
2	23795	GHMP_kinase Pmev_kin_Gpos Mev_gal_kin Pmev_kin_erg8	10
5	57879	GHMP_kinase Pmev_kin_Gpos Mev_gal_kin Pmev_kin_erg8	10
1.1	102761	Phosphomevalonate kinase Erg8 - Molecular Function: phosphomevalonate kinase activity (GO:0004631) - Cellular Component: cytoplasm (GO:0005737) - Biological Process: isoprenoid biosynthesis (GO:0008299) GHMP kinase - Molecular Function: ATP binding (GO:0005524) - Molecular Function: kinase activity (GO:0016301) - Biological Process: phosphorylation (GO:0016310) GHMP kinase C terminal	10
2	120330	GHMP kinase C terminal Phosphomevalonate kinase Erg8 - Molecular Function: phosphomevalonate kinase activity (GO:0004631) - Cellular Component: cytoplasm (GO:0005737) - Biological Process: isoprenoid biosynthesis (GO:0008299) GHMP kinase - Molecular Function: ATP binding (GO:0005524) - Molecular Function: kinase activity (GO:0016301) - Biological Process: phosphorylation (GO:0016310)	9
5	130612	GHMP kinase C terminal Phosphomevalonate kinase Erg8 - Molecular Function: phosphomevalonate kinase activity (GO:0004631) - Cellular Component: cytoplasm (GO:0005737) - Biological Process: isoprenoid biosynthesis (GO:0008299) GHMP kinase - Molecular Function: ATP binding (GO:0005524) - Molecular Function: kinase activity (GO:0016301) - Biological Process: phosphorylation (GO:0016310)	9

Preceding Unigenes (1)

Unigene	Build
SGN-U245471	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
Event Type:
Event Description:
Event Web URL:

SGN is supported by , and hosted at
Cite SGN using | Disclaimer