Sol Genomics Network

Unigene SGN-U271724

Unigene Basic Information

Unigene ID:	SGN-U271724
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	271724
mRNA sequence:	Length: 1475 bp

>SGN-U271724 Solanum tuberosum #4 (13 members)
GTTGGTTAGTTCTATCTCTTCCCTGTTCGTTCTTCCTTCCAGAATAATTGTAATGACTTCTGCAAGTGCAAATGAGAATTGCCTTGGTTG
GGCAGCAAGAGATCCGTCTGGAGTTCTTTCACCTTATGAATTCAACCGGAGGGCAGTCAGCAGTGATGATGTTCTGCTAGACATTGCATT
TTGTGGGATGTGTTTCGCTGATGTTATCTGGACCAGGAATATAATTGGAACTTCAAAATATCCTCTTGTGCCAGGACATGAAATTACGGG
AATTGTGAGAGAGGTTGGTACGGATGTTAAGCACTTCAAAGTTGGCGACCATGTTGGAGTTGGAACATATGTTAATTCATGCAGGGAATG
TGAATATTGTTGTGATGAATTAGAGGTTCATTGCTCAGAAGGAGCAATAAACACTTTTGATGGTATAGACGTCGATGGTACAGTTACTAA
AGGGGGATACTCCAGTTACATTGTAGTCAATGAAAGGTACTGCTTTAGAATACCTGAAAATTACCCGCTTGCATCTGCAGCACCTTTACT
ATGTGCTGGAATTACTGTTTATACTCCGATGATAAGACATAACATGAACCAACCGGGGAAATCTTTAGGTGTCGTTGGATTAGGTGGTCT
AGGCCACTTAGCAGTGAAGTTTGGAAAGGCTTTTGGATTAAAGTAACGGTATTCAGTACAAGTATATCTAAGAGAGAAGAGGCGTTAAAT
CTTCTTGGAGCAGACAAGTTTGTAATCTCATCAGATGAACAGCAGATGATGGCGCTGAGTAAGTCGTTTGACTTCATTATTAACTCCGCT
TCTGGAGATATCCCATTTGATACATACTTGTCGTTGTTAAAGACTGCTGGCGTTCTTGTTCTTGTTGGCTTCCCAAGTGAAGTGAAATTT
ATACCAGGAAGCTTAATCCTCGGTATGAAGAGCATCGTTGGGAGTGTAACGGGTGGAACAAAGCAGACACAAGAAATGCTGGATTTCTGT
GCTTCCCACAAAATTTATCCAGAAATTGAGATAGTCCCCATTCAGTATGTCAATGAGGCACTCGAAAGGTTAATAAAGAAGGACGTCAAA
TATCGCTTTGTAATTGATGTAGCGAACAGCATCAAGTAAAGGCGGGAGGAAGAGTATGTTCTCTTGAACTGATTTAATTAAACGTCGTAA
AATCTCATATGAGCATTCATGTGGCTGTTGTAACACAGCTATAAAGAAGCCTATTCCCTTTCGTGCATCAGCGTTGTGTTTTTTAAAAAG
TAGTATTTTTTAAGGTCCAAGGTATAAGGGAATGATATTATGCAGGCTACACTAGATAGCCATGTTCATGCTCATATTTTTGTTACTTTG
GTCGTGCTTATCATGTGAGATTACACTGGGTATGTTGTTGTTGTTGACGACTTGACGTTGTTGGGTTGTTCCTATCATCTTCTTTGTCTC
TTTATATATTGCTATAATTCATTCCAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (7)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	MXLF	Leaves	6585	1
Solanum tuberosum	PPI	leaf 6-week old leaf	5434	1
Solanum tuberosum	STM	mixed tissues	14805	4
Solanum tuberosum	TUBS	Tubers	5976	1
Solanum tuberosum	cPRO	roots in vitro grown stem cuttings	10187	2
Solanum tuberosum	cSTE	periderm and subperiderm 24 and 48 hour, and 5 and 7 day	5425	2
Solanum tuberosum	cSTS	sprouting eyes from tubers 12-14 weeks post harvest	9230	2

mRNA member sequences (13)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 4 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	100	Tdh Adh_zn_family	127
2	22202	Tdh ADH_zinc Adh_zn_family BchB	46
5	56416	Tdh ADH_zinc Adh_zn_family BchB	46
1.1	101421	GroES-like Alcohol dehydrogenase superfamily zinc-containing - Molecular Function: zinc ion binding (GO:0008270) - Molecular Function: oxidoreductase activity (GO:0016491)	210
2	118636	Alcohol dehydrogenase GroES-like Alcohol dehydrogenase superfamily zinc-containing - Molecular Function: zinc ion binding (GO:0008270) - Molecular Function: oxidoreductase activity (GO:0016491) Alcohol dehydrogenase zinc-binding GroES-like	41
5	129101	Alcohol dehydrogenase GroES-like Alcohol dehydrogenase superfamily zinc-containing - Molecular Function: zinc ion binding (GO:0008270) - Molecular Function: oxidoreductase activity (GO:0016491) Alcohol dehydrogenase zinc-binding GroES-like	41

Preceding Unigenes (2)

Unigene	Build
SGN-U247252	Solanum tuberosum #3
SGN-U250774	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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