Sol Genomics Network

Notice: The SGN server will be upgraded later today. SGN may be intermittently unavailable during the upgrade. We apologize for any inconvenience.

Unigene SGN-U271824

Unigene Basic Information

Unigene ID:	SGN-U271824
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	271824
mRNA sequence:	Length: 1639 bp

>SGN-U271824 Solanum tuberosum #4 (11 members)
CTGAAAACGACCGACCATCGCAAGAAGATGAGGTTCTCTCGTTGAGACCCTCCCAACCCCAAACACGTTTCTCTTTAACTCACCATTCTT
TCTTCTTTCCTGGTCCACATCCAGATTTCCTCCTTATGGTTACCATTCCACACTTCTCTTTCAACCCACAATAATATCTAATTCTAACTC
CCAACAACACAAATCCTCTCTTAGTTTTACCTTCCTTGTAATTCAAAACAATTGCCAACCTCCTTTTGAGAGAGAGCTCAATCATGGCTG
CTGCACCCTTCTTGCTTGAATCAAACCTTAAATGGAACCCTTTGTTGTATACTCCAAACTCAATACAGTATACCCGTTTAATCCATTATC
AAAAGCTTACACCTTCAAAATTCTCCAAACCCTCTAAACTGACGGTCAAATGTTTCAGCAAGAATCATAAAAATGTCTGTTTTAATGATG
GAAATGGGTTGGAAATGAAGAATAAAGAAAACCCATTTGAGATAGTTGTCAAAAGTGTCATGAAAGCTCTCAAAGCCTTGCAGAAGCCAG
CTGTAGCGGCTGTATTGGTGGGGTTGTTGTTGATGTATGATCCGAATTCAGCATTGGCTGCTTCTGGTGGGAGGATAGGTGGCAAGTCCT
TCTCGTCGTCGCGGAGCTCGGCTCCGTCGAGGGGGTATTCTATGAGGACAGCAGAGCCTAGATTTTCGTATTCAGCTCCGTATTATGCGC
CCTCCCCTTTTGGGTTTAGTGGGGGCGGTGTTTATGTAGGTCCAGCTGTTGGTTTTGGGTCAAGTGCGTTTCTGGTTATGATGGGCTTTG
CTGCGTTTATTATGGTTTCTGGGTTTCTGTCTGATCGGTCTGAGGGCAGTGTACTTACTGCTACTGACAAAACTAGTGTGCTCAAGCTAC
AGGTTGGATTGTTGGGGTTGGGTAGATCACTTCAAAAGGATCTCAACCGGATTGCTGAAGTGGCAGATACATCCACACCAGAGGGTTTAA
GCTTCGTCTTGACAGAGACGACACTAGCTTTGCTTCGGCACCCTGGTTATTGCATTTCAGCTTATTCATCTGTTGATGTCAAGAGGAGCA
TGGAGGAAGGCGAGAATCGATTCAATCAACTTTCCATTGAGGAACGTGGTAAATTTGATGAAGAGACACTTGTGAATGTGAACAACATCA
GAAGGAAAAGCTCTACGAGCCAGAGGGCAAATGGATTTAGCAATGAATACATAGTGGTTACAATCTTGGTAGCTGCTGAAGGTGTCTATA
AATTGCCTACTATTAACGGAAGTGGAGACTTGAAAGAAGCGTTGCAAAAGATTGCTTCTATTCCTTCCAGTAGAACACTGGCAGTTGAGA
TTTTATGGACTCCACAGAACGAAAACGACACATTATCAGAACGAGAACTTCTTGAGGATTACCCTCTCTTGCGACCTCTGTAAGAAATCT
GGGACTTTCTTAAAGATTATAGATAGTTATACAAGCTCCTATCAACCCCTTTTTGTTATCTCCATGTATATATATATATATATAACTCAT
AGAGCATCGACAATCCTTGTATAAGAATGAGGGTAAATCATCCTAATTGTACTAGTCAAGTTGCCTATATAAAAAGCCAGGATTCTCTCT
TAAGTGAAAATACATCTCT

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (7)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	MXLF	Leaves	6585	2
Solanum tuberosum	STM	mixed tissues	14805	2
Solanum tuberosum	TUBS	Tubers	5976	1
Solanum tuberosum	cPRO	roots in vitro grown stem cuttings	10187	1
Solanum tuberosum	cSTA	Axillary buds of stemp explants; swelling stolons; growing stolons; growing sink-tubers 1 to 3 days (plates 1-20), 4 to 6 days (plates 21-40), 7 to 10 days (plates 41-60)	10537	2
Solanum tuberosum	cSTB	leaves and petioles 8 weeks old plants	10327	1
Solanum tuberosum	cSTS	sprouting eyes from tubers 12-14 weeks post harvest	9230	2

mRNA member sequences (11)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 2 | go: 0 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	1773		10
2	25238		6
5	59252		6
1.1	101767	Helix-loop-helix DNA-binding Protein of unknown function DUF1517	39
2	121511	Protein of unknown function DUF1517	6
5	131724	Protein of unknown function DUF1517	6

Preceding Unigenes (1)

Unigene	Build
SGN-U246617	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
Event Type:
Event Description:
Event Web URL:

SGN is supported by , and hosted at
Cite SGN using | Disclaimer