Sol Genomics Network

Unigene SGN-U271876

Unigene Basic Information

Unigene ID:	SGN-U271876
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	271876
mRNA sequence:	Length: 1370 bp

>SGN-U271876 Solanum tuberosum #4 (6 members)
TGGAAATTGATTTGTCTAATCTTGGAACTGTCAACACAATGTTTGCAGCATTGTTCAGCAAGTTGGGCGTTCCCATCAAAACGACTGTGT
CTGCTAATGTTCTTGAAGAAGCTTTGAATGGAACTGTCACAATCCGCCCTCTTCCAATCGGGACATCACTTAGTGGAAAGGTTGAAAAGC
AAAGTGCCCATTTTTTCGGTGTAACGATTAGCAATGAACAAGCAGAGGCAGGGCTTGTAGTTAGAGTTACTTCAGCAGCTCAAAGCAAGT
TTAAGCTACTGTATTTTGAACAAGATGCAAATGGAGGTTATGGCCTGGCTTTGCAGGAAGATAGTGAGAAAACGGGTAAGGTAACGTCAG
CAGGAATGTATTTCCTGCACTTTCAGGTGTACAGAATGGATTCAACTGTAAATGCGTTAGCAATGGCTAAGGACCCTGAAGCTGCTTTCT
TTAAGAAGCTGGAGGGCCTTCAACCTTGTGAGGTCTCAGAACTAAAAGCTGGCACTCACATATTCGCTGTTTATGGAGATAATTTCTTTA
AGCCAGCTACTTATATAATTGAGGCTCTTTGTGCCAAGTCATATGAGGATACTACTGTTAAGCTCAAGGAAATCGAGGCTCAGATTTTGA
GGAAGAGAAATGAGCTTCGGCAGTTTGAAATCGAATATAGAAAGGCATTGGCACACTTCCAGGAAGTAACCAACAGATACAGCCAAGAGA
AGCTGTCTGTCGATGAGATGCTGAAACAAAGAGACAGCATCCACTCTTCATTCACAGTTTCAAGGTCAATTGCTAATCTAAGCGGCAGTG
GAAGCGGGCATTTCAGTAATGGAAGTAGCAGTAAAGTCCTTGGCGAAGATTATAAAACCGATAGTCCAGGGGAAGATGGAAGCTCAGACT
CCAAAGACAAGTCATCAAAGAAAAGATGGTTCAACCTTAACCTTAAAGGATCCGATAAAAAGAACTGAAAAGTCGACGATTATCTATGTT
CTATACTTGATCCCAAATCAAACGCCAAGGGAGCAGGTATTGCGCTGCCGGAACAAGTCCCTTCATATATTCTTTGTTCTATTTGTTAGT
TTGTGCTTTTACCAGATGCATTTTGTCTTTAGGGAAGTGATGTTTGGAATATATATATATAGGTGGTGTTTTTTGTGTTTGTATGCATGA
TTCTTGTGATGTACCATAAAACTAGGCTGATCTTCAGCTGTCAATCCATATAAGATTATAGAATTAAGAAGGTGTTGTAATTTTAGTCTA
TGGACATGTTCTTTTTTTGGTTGGCATTGTGAAGTTGTAATATTTCAATGGTGGGAATCTCAATTCTTACAAAAAAGAAAAATTAAGAGT
GGAAAAAAAAAGGGGGGGCC

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (5)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	IVROOT	Root	5850	1
Solanum tuberosum	PPC	leaf 6 week old	5062	1
Solanum tuberosum	STM	mixed tissues	14805	2
Solanum tuberosum	cPRO	roots in vitro grown stem cuttings	10187	1
Solanum tuberosum	cSTS	sprouting eyes from tubers 12-14 weeks post harvest	9230	1

mRNA member sequences (6)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 0 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	9	DnaJ_N	612
2	23225	Hsp_DnaJ DnaJ_N	14
5	57118	Hsp_DnaJ DnaJ_N	16
1.1	101369	Heat shock protein DnaJ N-terminal - Molecular Function: heat shock protein binding (GO:0031072)	604
2	119168	Heat shock protein DnaJ - Biological Process: protein folding (GO:0006457) - Molecular Function: heat shock protein binding (GO:0031072) - Molecular Function: unfolded protein binding (GO:0051082) Heat shock protein DnaJ N-terminal - Molecular Function: heat shock protein binding (GO:0031072)	19
5	129518	Heat shock protein DnaJ - Biological Process: protein folding (GO:0006457) - Molecular Function: heat shock protein binding (GO:0031072) - Molecular Function: unfolded protein binding (GO:0051082) Heat shock protein DnaJ N-terminal - Molecular Function: heat shock protein binding (GO:0031072)	19

Preceding Unigenes (1)

Unigene	Build
SGN-U245660	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
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