Sol Genomics Network

Unigene SGN-U271898

Unigene Basic Information

Unigene ID:	SGN-U271898
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	271898
mRNA sequence:	Length: 2358 bp

>SGN-U271898 Solanum tuberosum #4 (12 members)
AAAAGATTATACATTATATGAGGAAGTTGGAGATGGTGTCAGTGCAACTGTGTATCGGGCTCTGTGCATTCCTCTTAATGAAATTGTTGC
AATCAAGGTTCTAGATTTGGAGAAGTGCAACAATGATCTGGATGGAATCCGGAGAGAGGTCCAGACCATGATCTTGATTGATCATCCAAA
TGTATTGCGTGCACACTGCTCATTCACTGCAGGTCACAGTCTTTGGGTTGTCATGCCATTCATGGCTGGAGGATCTTGCCTTCATATCAT
GAAATCTTCTTATCCTGATGGTTTTGAAGAGCCTGTAATTGCTACACTATTGCGCGAGGTCCTCAAAGCCCTTGTATATCTTCATTACCA
TGGACACATCCATAGAGATGTAAAGGCTGGGAACATTTTGATTGATTCAAATGGTGCTATTAAATTGGCAGATTTTGGAGTTGCTGCTTG
CATGTTTGATACTGGTGATAGGCAGCGTTCAAGAAATACTTTTGTTGGAACTCCATGCTGGATGGCTCCCGAAGTGATGCAGCAACTGCA
TGGATATGATTTTAAAGCAGATATATGGTCGTTTGGAATAACAGCCCTTGAACTTGCTCATGGTCATGCACCATTCTCCAAGTACCCACC
CATGAAGGTTCTGCTGATGACCCTACAGAATGCACCTCCAGGCCTGGACTATGAACGGGACAAGAGATTCTCTAAGTCTTTTAAAGAAAT
GGTTGCTGCTTGCTTAGTAAAAGATCCAAAGAAGCGTCCGTCTTCTGAGAAGCTTTTGAAGCACCCTTTCTTTAAACAAGCACGAGGACA
TGATTATTTGGCACGTACAATCCTTGATGGCCTTCCACCTCTAGGTGATCGTTTTAGGATGCTTAAGGCTAAAGAAGCAGATTATCTTTT
ACAGAACCAGGCAATGTATGAGGACAAGGACCATTTGTCACAGCAAGAGTATATTCGTGGTATCAGTGCTTGGAATTTCAATCTGGAGGA
TCTGAAGAACCAAGCTGCTCTTCTTCCAGATTTTGACGACATTCCAGATGCTGAAGATTCAAGTACCAGGGGGAAGCTAAGGGAGGGAAA
TGGTGACGTTGGTTCTGTAGCAGAAAGGCATAATCAGTCGAGTGTCCTATCTCACGAGGATGAGATGAATGACAATCATGATTTGGATGG
TTCACTTGCTGCATTTCCTATTAAGCCTCTTCAAGCACTCAAGGGATGTTTTGATATGTGTGAAGATGACATAACTGCTAGTAGTCCAAG
TTGGGAAGATACTATGCAATCAGAGTCTACTCAGCAGAATGATATGCTGTCACTAGCGAAAATTGAGGACCAAGATGGTGGAAAAGATGA
TGGTGAGAATCTGCGACAGAGTAGCTCCTTGCCACGTTCTGTTATTCCTGGGCATAAAAAGTTTTTTAGTGGTTCACTGCTACAGGATAA
CGCTCTTTCACCCAAAAAAGTTGTTACTGATGGAGAGAGGGAATATCAACATCCGAAGTACCAGTCTGAGCGAAACTATAGCGGCCCATT
GCAGTACCGACATAAAAAAGATTTAGGAGAAGATTCATCAGAAGGAGCTGTTGTCCAACGCAAGGGACGTTTTCAAGTCACATCAGCAGA
TCTAAGTCCCAAGGAACCTACAAGCTATTTCTTTAACCCAGTTCAGGGAGGTTCTACTAGTGCAATTAATCTAGGTCTAGCAGCTGCTTC
ACTACTTCCAACATTGCAATGCATTCTACAGCAGAATACTTTGCAAAGGGAGGAATTAGTGAAGCTGATCAAGTTCGCAGAGCGAGGATC
TGTCAACCCTATAGACTTGGCTGAAGCTGGGACCAGTGATCTTCTGCAGATGCCTGCTACTTCTGTTAGGGAGAGAGAACTGCAATCAAT
GGTCATTCAATTGCAACAAAGCATTGGAAGTCTTGTGGAAGAGTTGCAGAGACAAAAGATGAAAAATGTTCAGTTGGAAAAGAAATTGAA
TCGCTGATAAAAACTAGAGGATATGAAGGCTACACTACATGGTTGGTGATGTTACTACACATGCTTGTGCTGGGGCACATCGTTAAGTTA
CTTGGCGAGTGGGTTGTTGTATTTTTTGTGTACCATATGTGTGAATGTAAAGTAGGCACCCAAATTTTGAGATGCTATTCATTGTCAGAA
TCTTGATTATCTATTGTAATATACCAATTGGGTATTGTATTTAAGTTGTTCTTCAATATTAATTGAAATTCTAGGAGCAAAAAAAATGCA
GCTTGTGTAAATCACCCTTGCGAAACCCATACCCTTGTTCCGAAATAAACCTAATAAACCTCTATGGAGGAGTTTGGTCCGATANAAACA
ATAACAATAACAATATTA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (7)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	IVROOT	Root	5850	1
Solanum tuberosum	PPI	leaf 6-week old leaf	5434	3
Solanum tuberosum	STM	mixed tissues	14805	1
Solanum tuberosum	TUBS	Tubers	5976	2
Solanum tuberosum	cPRO	roots in vitro grown stem cuttings	10187	3
Solanum tuberosum	cSTE	periderm and subperiderm 24 and 48 hour, and 5 and 7 day	5425	1
Solanum tuberosum	cSTS	sprouting eyes from tubers 12-14 weeks post harvest	9230	1

mRNA member sequences (12)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 5 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	2	Prot_kinase	1610
2	27291		4
5	61266	Pox_A_type_inc ACN9 Prot_kinase	4
1.1	101361	Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468) Protein kinase-like	1515
2	118993	Protein kinase-like Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468) Serine/threonine protein kinase - Molecular Function: protein serine/threonine kinase activity (GO:0004674) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	23
5	132072	Protein kinase-like Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468) Serine/threonine protein kinase - Molecular Function: protein serine/threonine kinase activity (GO:0004674) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	6

Preceding Unigenes (1)

Unigene	Build
SGN-U246209	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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