Sol Genomics Network

Unigene SGN-U271916

Unigene Basic Information

Unigene ID:	SGN-U271916
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	271916
mRNA sequence:	Length: 1581 bp

>SGN-U271916 Solanum tuberosum #4 (5 members)
CTTTACAAAAGAAGCCCAAAGGAAATTGAATTTTTTTTCTCAAAGAAGTACAAAAATTAACTCTCTTTTTCTAATATATGCCTTCTCTTA
AGCTAAGAATCAATTTTTCAGGTTTCCCTCATTGCTGTTACTGCTGCTCCACTCCCAAAATCCCTTCTTTCACTGCATTTCAGAGTGAAG
CTAATATTAAATCAACCATGGATCGGCTAACCAGTGCAGCACGTCTCATGATAGTCTCAGATCTTGACTATACAATGGTCGATCATCATG
ATTCCGAGAACCTCTCTCTGCTTAGGTTCAATGCTTTATGGGAAGCCAATTATCGCGAAAACTCCTTGTTAGTGTTCTCAACTGGGAGAT
CACCAACACTTTACAAGGAGTTGAGAAAAGAGAAGCCCATGCTAACCCCAGATATTACCATTATGTCTGTCGGGACTGAAATAACATATG
GGAACTCTATGTTTCCAGATGACAGTTGGGAAGCATTTTTAAATGACAAATGGGATCGGAAAATAGTGACAGAGGAGACGAAAAAATTTC
GTGAACTAACACTTCAGTCAGAAACGGAGCAACGACCTCACAAGGTCAGTTTCTATGTTCAGAAAGACAAGGCTCAAGATATAATGAAAA
CTCTTTCCAAACGCTTGGAAGAACGTGGGTTGGATGTCAAAATAATTTACAGTGGAGGGATGGCTTTAGATATTTTGCCTCAAGGTGCTG
GCAAAGGACAAGCACTTGCGTATTTGCTGAAGAAATTAAAAAGTGAGGGTAAATTACCAAACAACACGCTTGCCTGTGGTGACTCTGGAA
ATGATGCTGAGCTTTTCAGCATCCCGGATGTTTATGGTGTGATGGTAGCGAATGCACAGGAGGAATTATTACAATGGCATGCTGCAAATG
CGAAAGATAATCCTAAAGTAATTCATGCAACAGAGAGATGTGCCGCGGGTATAATACAAGCCATTGGACGTTTCAACCTGGGACCAAGTA
CCTCTCCCAGAGACGTTACCGACATGTCAGACTGCAAGATGGAGAACTTTGTTCCTGCTTATGAAATCGTCAAATTTTACCTGTTTTTCG
AGAAATGGAGGCGTGGAGAGATTGAGAATTCTGACCTTTACTTGTCGAACCTGAAAGCAGTTTGTAGACCATCTGGTACTTTTGTGCACC
CATCTGGAGTTGAGAAATCTCTCGAGGAATGCGTAAATACATTCAAAAAGTGTCATGGCGACAAAAAGGGTAAACAATATCGCATTTGGG
TTGATCAAGTCTTACCTACGCAGGTTGGTTCAGATTCATGGTTAGTAAGTTTCAAGAAATGGGAGCTTTGCGGTGAAGATCGACAATGTT
GCATAACTACCGTCTTATTAAGCTCAAAGAATGTGACTGTTGCAGACGGGCTCACTTGGACACACGTGCATCAGACTTGGCTGCAGGGCG
TGGAGTCAGCAAGTGACTCCACGACCTGGTTCTTCTAGGTTTGACTCTGGAAAGCCGGCCTCCTTTTACACATATGCACATTGTCCCTCT
TAACACTGTTTGTTCTCATTCTTCCTTGATGATGAATGTATTACAAACCCA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (4)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	CSCH	Tubers	5038	1
Solanum tuberosum	cPRO	roots in vitro grown stem cuttings	10187	1
Solanum tuberosum	cSTA	Axillary buds of stemp explants; swelling stolons; growing stolons; growing sink-tubers 1 to 3 days (plates 1-20), 4 to 6 days (plates 21-40), 7 to 10 days (plates 41-60)	10537	2
Solanum tuberosum	cSTD	dormant tuber one month post harvest	5045	1

mRNA member sequences (5)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 2 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	1115	SPP_plant-cyano HAD_SF_YedP HAD_SF_IIB Hypothet_cof SPP_like_arch Suc_phosP	17
2	22970	SPP_plant-cyano HAD_SF_YedP HAD_SF_IIB Hypothet_cof SPP_like_arch Suc_phosP	17
5	57082	SPP_plant-cyano HAD_SF_YedP HAD_SF_IIB Hypothet_cof SPP_like_arch Suc_phosP	17
1.1	101747	Sucrose-phosphate phosphatase Sucrose-6F-phosphate phosphohydrolase plant and cyanobacteria HAD-superfamily hydrolase subfamily IIB - Molecular Function: catalytic activity (GO:0003824) - Biological Process: metabolism (GO:0008152) Sucrose phosphatase plant and cyanobacteria Sucrose-6-phosphate phosphohydrolase C-terminal	41
2	119666	Sucrose-6F-phosphate phosphohydrolase plant and cyanobacteria HAD-superfamily hydrolase subfamily IIB - Molecular Function: catalytic activity (GO:0003824) - Biological Process: metabolism (GO:0008152) Sucrose-phosphate phosphatase Sucrose phosphatase plant and cyanobacteria Sucrose-6-phosphate phosphohydrolase C-terminal	13
5	130003	Sucrose-6F-phosphate phosphohydrolase plant and cyanobacteria HAD-superfamily hydrolase subfamily IIB - Molecular Function: catalytic activity (GO:0003824) - Biological Process: metabolism (GO:0008152) Sucrose-phosphate phosphatase Sucrose phosphatase plant and cyanobacteria Sucrose-6-phosphate phosphohydrolase C-terminal	13

Preceding Unigenes (1)

Unigene	Build
SGN-U247680	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
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