Sol Genomics Network

Unigene SGN-U272225

Unigene Basic Information

Unigene ID:	SGN-U272225
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	272225
mRNA sequence:	Length: 1586 bp

>SGN-U272225 Solanum tuberosum #4 (11 members)
TCGCACATCCCAGCTCAAAGTGGCTGATTTCTCATTCAACTTTCTTATTGGAAGCATACCAAAGTGTTTGGGTTACCTTCCAAAATCTAG
CTTTCAAGGAAATTGCCTTCAGCACAAAGACCCGAAGCAACGGTCTGCTGCTTTATGTGGTAGCACTCCGCCTCCCACTAGCCATGCATC
GACACTCAGCAATAAGCACCAGCCTGTTGAAGAACCGAGACATCAGACTTCTTCCAAGCCCACTTGGCTTTTGGCTTTAGAAGTGGTAAC
AGGAGTTATGGTGGGTTCTCTCTTCATTGTAGGTCTTGTGACTGGCCTTCAGAGGCTTAAGAACAAATCGTCAATCATACTTTGGAAGAA
ATCAGGAAGTGAGAAAGATCATATGACAATTTATGTAGATACTGGTATGCTGAAAGATGTTGTAATATACAGCAGACAAGAACTTGAGGT
AGCTTGTGAAGATTTCAGCAACATCATTGGATCCTCACCAGATAGCATAGTTTACAAAGGAACCATGAAAGGTGGACCTGAAATTGCTGT
AATATCCCTTTGCGTCAAAGAAGAGCACTGGACAGCCTATCTAGAACTTTATTTTCAGAAAGAGGTGGCAGAATTGGCCAGAATAAATCA
CGAGAACGCTGGGAAACTTCTAGGCTATTGCAGAGAGAGTAGTCCCTTTACGAGGATGTTGGTGTTTGAATATGCATCTAATGGGACATT
ATATGAACACCTTCATTATGGAGAAGGATGCCAACTATCTTGGACACGCCGGATGAAAATAGTTATTGGCATCGCTAAGGGACTGACATA
TTTCCATTCAGAACTTGACCCTCCATTTACTATATCAGAACTGAATTCAAATTCTGTATATCTCACCGAAGATTTTTCTCCCAAGCTTGT
TGATTTTGAAAGCTGGAAGTCGATAATTTCCAGATCAGAAAAGAATTCAGGTGCTATCAGTAGTGAAGGAGCAATATGTGTCCTTCCAAA
TACTCTCGAGAGCCGTCATCTCGATGTCCAGGGTAACATTTATGCATTTGGAGTACTTCTACTGGAAATAATCAGTGGGAGACCTCCATA
TTGCAAAGACAAAGGGTGCTTAGTAGATTGGGCTAAGGAATTTCTTGAAGTGCCGGAGGTTTTATCCTACGTTGTGGATCCCGAGTTGAA
ACATTTCAAACAGGAAGACCTCAAAGTGATATGTGAGGTGATCAACCTTTGCATCCACCCGACTACGAGTAGGAGGACATCCATGAAGGA
CCTGTGTGCTATTCTGGAGAGCAACATTGACACTTCCATCACTGCAGAGCTCAAGGCGTCTTCGTTGGCATGGGCCGAGCTTGCACTTTC
ATCCTAACTGACAGAAGGCTAACACAGTATATATATCTGAAATATGTAATTGTCTAGCGCTTTCTCCTTTTCGTTTTTTGACCTCTCGAT
TTCGTTCCCAATGTGTTCTGGAGTGATGGTTGAGTTCATGTAAATTTTGAGTCTGTAGGATAAAATTAGAGTTGAAGAGAAGCTACTGTT
GATTCTTTGTAAACAAAGTGGTTCTTGTTACAATGAATGAGTGTTCATAGTGAATG

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (9)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	CSWB	Tubers	6124	1
Solanum tuberosum	IVROOT	Root	5850	2
Solanum tuberosum	MXFL	Floral buds	6603	1
Solanum tuberosum	MXLF	Leaves	6585	1
Solanum tuberosum	PPI	leaf 6-week old leaf	5434	1
Solanum tuberosum	STM	mixed tissues	14805	2
Solanum tuberosum	SWST	Stolon	5942	1
Solanum tuberosum	cSTA	Axillary buds of stemp explants; swelling stolons; growing stolons; growing sink-tubers 1 to 3 days (plates 1-20), 4 to 6 days (plates 21-40), 7 to 10 days (plates 41-60)	10537	1
Solanum tuberosum	cSTS	sprouting eyes from tubers 12-14 weeks post harvest	9230	1

mRNA member sequences (11)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 4 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	1	Prot_kinase	3744
2	21970	Prot_kinase	1313
5	60690		5
1.1	101360	Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	4049
2	118407	Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	1853
5	133065		5

Preceding Unigenes (1)

Unigene	Build
SGN-U246678	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
Event Type:
Event Description:
Event Web URL:

SGN is supported by , and hosted at
Cite SGN using | Disclaimer