Sol Genomics Network

Unigene SGN-U272278

Unigene Basic Information

Unigene ID:	SGN-U272278
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	272278
mRNA sequence:	Length: 1695 bp

>SGN-U272278 Solanum tuberosum #4 (6 members)
TGAGCCAAAAAGCTAACTTTTTTTTTTTCATGCTTCTGTTTTACTGTATAGCAAAGCATACCAAACACTGATAATAACCCCACATTTCCA
TCCCAAGATTTCATGTTTTCTTTGTTGAGATTTCTCTTTGCCTTTTACTTCAAAGGAAGGTTTCCTTTTGGCATATGCTTCAATTAAGGA
AGGTCTATTTTCCCATTTCTAAAAGGGTCCCTCTTTTTTTGTTTTCTTGGTATTTTTGCATATTTGAGAAATGGGATTCTTGATTTGAAA
ATGGCTTCATTTCCCAAATGGGGTTTGGAGATTTTAGGAGTATAAGAGATCTGGGGTTTGGATTTTTCTTCATTGTAGTGAGTAGAGGTT
GTGTGTAGTGTTGGTAGAGGCTTACTTCTACTTGTGGGATCTCATCATAAATAGGTTTCAATAAGATGGCATCTGACCTTAATTTCGAAC
TGTCTAAGAAAACTCATATATTTCATCTCAAGGTGTGGGTTTTATTAGCCATCTTTGTTGGACTTTTTATTGTGGTAATTCTTTTGCTGC
TGCCGTTTTGTTCTTCTCGTAAAAAATCAAGAAAATCTCATGATACACTACCCATAAGCAAAATTCCTTCTGTGTGCAAAGAAATAAGAG
TTGATCAAAACTCAGCAAGCAACTATGGGAGCCACTATAGGAATCCCCTTGCATTTCAAGACACATACTGTGAGAAAGATTCCGATAAGC
TTTTGGCACATTCAAATATTGACAAGATGAAAGATTTTGACATTAATAGTCAATCAGGTTCATTTAATTATTTAGACAAAGACGGAACAT
TTGAGTCCGGGGAAAAGGGAGTTACCGGAACAGTAAATCATCTTTCACATCCTGCGAATGTCCCGTCCCCTCTCTCTGGTTTGCCTGAGT
TCTCTCACCTAGGTTGGGGCCATTGGTTTACTCTAAGGGACCTTGAAACTGCAACCAACAAGTTTGCTAAGGATAACATCATTGGAGAGG
GTGGTTATGGCATTGTTTACCGGGGACAGCTGATTAACGGAACTGAAGTTGCTGTTAAAAAGCTATTGAATAATTTAGGACAAGCAGAGA
AAGAATTTCAAGTGGAAGTTGAGGCCATCGGTCATGTCCGACATAAGAATTTGGTTAGACTTTTGGGCTACTGTATTGAAGGAACTCACA
GGTTACTGGTTTATGAGTGCATAAACAATGGGAATTTAGAGCAGTGGCTACATGGAGCTATGCAACAGCACGGATATCTTACATGGGAAG
CACGGATGAAGATTCTCCTTGGCACTGCTAAAGCGTGACTTTTCTTCTATTTTCAACTTAGCATTTACTATCTCATACTCCCACCGTTCC
AGTTTAGGTGTCTTAGTTTGACTGAGCACAGAGTTTGGAACCAAAAGGAGACTTTTGAATCTTGTGGTGTTAACTGTGGTCCTTTGAATC
CTGTGGTCTTAATGTTCCATGTAGAATGTTGGAATTGGAAAACTTACTAAATATAGAAAGAGGCATTCTTTTTGGGACGGGCTAAGAAGG
AAAGTAAGACGCTTGAATTGGGATGGAAGGAGTTTTTTTTTTTGTTCTCTTATAAATGTTTTTTTATACTTTTAGTCTGGCATATTTACA
CGAGGCAATTGAGCCCAAGGTGGTGCATCGTGACATCAACTCAAGCAACATATTGCCAGATGATGACTTCAATGC

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (5)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	IVROOT	Root	5850	1
Solanum tuberosum	STOL	Stolon	6462	1
Solanum tuberosum	cPRO	roots in vitro grown stem cuttings	10187	2
Solanum tuberosum	cSTD	dormant tuber one month post harvest	5045	1
Solanum tuberosum	cSTS	sprouting eyes from tubers 12-14 weeks post harvest	9230	1

mRNA member sequences (6)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 5 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	1	Prot_kinase	3744
2	21970	Prot_kinase	1313
5	56255	Prot_kinase	690
1.1	101360	Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	4049
2	118407	Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	1853
5	128927	Protein kinase-like Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	615

Preceding Unigenes (1)

Unigene	Build
SGN-U246560	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
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Start Date:
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